HHSEARCH alignment of GI: 254780227 and SCOP domain: d4pfka_

Alignment
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00  E-value=0  Score=613.44  Aligned_cols=310  Identities=23%  Similarity=0.305  Sum_probs=278.2

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             37999836877514899999999999985699789998383660107991304626988887464078740033678886
Q gi|254780227|r   30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLT  109 (426)
Q Consensus        30 krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~~~  109 (426)
                      ||||||||||||||||++|+++++++..  .+++|||+++||+||++++++   +++++++..|.++|||+|||||++++
T Consensus         2 krIaIl~sGG~~pgiNa~i~~~v~~~~~--~~~~v~g~~~G~~Gl~~~~~~---~l~~~~~~~~~~~gGt~lgs~r~~~~   76 (319)
T d4pfka_           2 KRIGVLTSGGDSPGMNAAIRSVVRKAIY--HGVEVYGVYHGYAGLIAGNIK---KLEVGDVGDIIHRGGTILYTARCPEF   76 (319)
T ss_dssp             CEEEEEEESSCCTTHHHHHHHHHHHHHH--TTCEEEEESSHHHHHHTTCEE---EECGGGGTTCTTCCSCTTCCCCCTTS
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHCCCCCC---CCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             8899987688768999999999999987--799999983166875679951---59989998798648630035888865


Q ss_pred             CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             53011101234567456999999998639988999488257899999999998518996288522223477222114633
Q gi|254780227|r  110 NFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLG  189 (426)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiG  189 (426)
                      .            .++.+++++++|++++||+|++|||||||++|++|+++      +++||||||||||||++||+|||
T Consensus        77 ~------------~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td~t~G  138 (319)
T d4pfka_          77 K------------TEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTDFTIG  138 (319)
T ss_dssp             S------------SHHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCSSCBT
T ss_pred             C------------CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHC------CCCEEEEEEECCCCCCCCCCCCC
T ss_conf             5------------41004469999998336638995383689999998733------67555221021688678566310


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             56599999999999998775166616999976987428999987401433231011111110001457652328786559
Q gi|254780227|r  190 ALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFN  269 (426)
Q Consensus       190 fdTA~~~~a~~i~~l~~~A~s~~~~~~iVEvMGR~aG~LAl~~ala~ga~~~~i~~~~~~~~~~~~~~~d~iliPE~~~~  269 (426)
                      |+||++++++++++++.||.|+ +||||||+|||+|||||++++||++|                    |++||||.||+
T Consensus       139 f~TA~~~~~~~i~~l~~~a~s~-~rv~ivEvMGR~aG~lA~~~~la~~a--------------------~~iliPE~~~~  197 (319)
T d4pfka_         139 FDTALNTVIDAIDKIRDTATSH-ERTYVIEVMGRHAGDIALWSGLAGGA--------------------ETILIPEADYD  197 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTTC--------------------SEEECTTSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCC-CCEEEEEECCCCCCHHHHHHHCCCCC--------------------CEEEECCCCCC
T ss_conf             8999999999999987430567-64699996688886899985455787--------------------68985477998


Q ss_pred             HHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             89999999998502-89538995042111111012320112222234445443556648999999998718743188418
Q gi|254780227|r  270 LEVEIERLSKVMEK-KGSVAIFVSEGACRDVIMDNRLSSGEKIKRDSFGHILLDKMNVGSWFADKFANMIKAERSIVQKS  348 (426)
Q Consensus       270 ~~~~~~~i~~~~~~-~~~~vIVvsEG~~~~~~~~~~~~~~~~~~~d~~g~~~l~~~~i~~~La~~i~~~~~~~~~~~~~l  348 (426)
                      ++++++.+++++++ +++++||+|||+..                             +..+.+.+++..+.+ +|+..|
T Consensus       198 ~~~~~~~i~~~~~~~k~~~ivvvsEG~~~-----------------------------~~~~~~~i~~~~g~~-~r~~~l  247 (319)
T d4pfka_         198 MNDVIARLKRGHERGKKHSIIIVAEGVGS-----------------------------GVDFGRQIQEATGFE-TRVTVL  247 (319)
T ss_dssp             HHHHHHHHHHHHHTTCSCEEEEEETTTCC-----------------------------HHHHHHHHHHHHCCC-EEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEEECCCCH-----------------------------HHHHHHHHHHHCCCE-EEEEEC
T ss_conf             78889999988862687138998335320-----------------------------134665566534962-688524


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHCCCCCCCCCHHHHH
Q ss_conf             86123558986799999999999999997799866999985986996430898526882077758999
Q gi|254780227|r  349 GYFARSAPSGSEDLSLIKKMVVLAVDSAISGISGVTGEDERENNILRIIKFEDIRGGRVFDTNTPWFS  416 (426)
Q Consensus       349 Gy~qRgg~Ps~~Dr~~a~~lG~~Av~~~~~G~sgvmv~i~~~~~~~~~i~~~~i~~~k~vd~~~~~~~  416 (426)
                      ||+|||+.||++||.+|++||..||+++++|+||+|++++++++.++|++ +.+...|++|++  ||.
T Consensus       248 G~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g~sg~mv~i~~~~~~~vpl~-~v~~~~k~v~~~--l~~  312 (319)
T d4pfka_         248 GHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNNQLVDHDIA-EALANKHTIDQR--MYA  312 (319)
T ss_dssp             GGGGGCSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEEEHH-HHTTSCCCCCHH--HHH
T ss_pred             CCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECHH-HHHHCCCCCCHH--HHH
T ss_conf             70003799888999999999999999997699985999999999987399-997167779999--999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: ATP-dependent phosphofructokinase
species: Bacillus stearothermophilus [TaxId: 1422]