Query gi|254780227|ref|YP_003064640.1| pyrophosphate--fructose-6-phosphate 1-phosphotransferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 426 No_of_seqs 135 out of 1583 Neff 7.0 Searched_HMMs 13730 Date Mon May 23 20:38:54 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780227.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2f48a1 c.89.1.1 (A:4-553) Pyr 100.0 0 0 629.6 35.8 360 27-421 67-514 (550) 2 d4pfka_ c.89.1.1 (A:) ATP-depe 100.0 0 0 613.4 36.3 310 30-416 2-312 (319) 3 d1pfka_ c.89.1.1 (A:) ATP-depe 100.0 0 0 609.9 35.6 314 30-420 3-317 (320) 4 d2bona1 e.52.1.2 (A:5-299) Lip 95.5 0.04 2.9E-06 30.2 8.0 90 123-224 38-129 (295) 5 d2qv7a1 e.52.1.2 (A:1-312) Dia 95.1 0.027 1.9E-06 31.4 6.2 88 124-223 44-131 (312) 6 d1z0sa1 e.52.1.1 (A:1-249) Ino 94.5 0.029 2.1E-06 31.2 5.1 32 138-175 39-70 (249) 7 d1u0ta_ e.52.1.1 (A:) Inorgani 94.4 0.02 1.4E-06 32.2 3.9 56 136-206 69-126 (302) 8 d1rrma_ e.22.1.2 (A:) Lactalde 93.1 0.22 1.6E-05 25.5 7.4 58 124-181 73-145 (385) 9 d1vlja_ e.22.1.2 (A:) NADH-dep 92.6 0.23 1.7E-05 25.3 6.9 57 124-180 78-147 (398) 10 d1o2da_ e.22.1.2 (A:) Alcohol 91.9 0.25 1.8E-05 25.1 6.5 58 124-181 72-142 (359) 11 d1jq5a_ e.22.1.2 (A:) Glycerol 91.4 0.39 2.8E-05 23.9 7.5 53 124-181 71-123 (366) 12 d1a9xa3 c.30.1.1 (A:1-127) Car 89.9 0.52 3.8E-05 23.0 9.5 116 25-178 3-124 (127) 13 d2a84a1 c.26.1.4 (A:3-288) Pan 88.4 0.48 3.5E-05 23.2 5.5 20 213-232 30-50 (286) 14 d1oj7a_ e.22.1.2 (A:) Hypothet 87.6 0.75 5.4E-05 22.0 6.3 56 124-179 74-145 (390) 15 d1ihoa_ c.26.1.4 (A:) Pantothe 85.5 0.75 5.4E-05 22.0 5.1 29 212-240 21-50 (282) 16 d1kq3a_ e.22.1.2 (A:) Glycerol 70.8 2.7 0.0002 18.4 5.1 51 125-181 71-121 (364) 17 d1v8fa_ c.26.1.4 (A:) Pantothe 68.7 3 0.00022 18.1 6.5 25 173-198 104-128 (276) 18 d1ujna_ e.22.1.1 (A:) Dehydroq 67.8 3.1 0.00023 18.0 6.0 52 123-177 66-120 (347) 19 d1a9xa4 c.30.1.1 (A:556-676) C 67.1 3.2 0.00023 17.9 8.6 109 27-179 2-116 (121) 20 d1vcoa1 c.23.16.1 (A:298-547) 64.1 3.7 0.00027 17.6 5.1 58 137-210 57-116 (250) 21 d1s1ma1 c.23.16.1 (A:287-544) 58.9 4.5 0.00033 17.0 4.7 59 137-211 56-116 (258) 22 d1zq1a2 c.88.1.1 (A:76-438) Gl 54.9 5.2 0.00038 16.6 9.1 63 123-187 75-141 (363) 23 d1dbqa_ c.93.1.1 (A:) Purine r 52.8 5.6 0.00041 16.3 20.2 92 30-179 1-92 (282) 24 d1gsoa2 c.30.1.1 (A:-2-103) Gl 52.4 5.7 0.00042 16.3 5.1 96 30-175 3-98 (105) 25 d4pgaa_ c.88.1.1 (A:) Glutamin 51.6 5.9 0.00043 16.2 7.4 71 124-196 65-139 (330) 26 d1pvda3 c.36.1.9 (A:361-556) P 49.9 5.3 0.00039 16.5 2.7 31 140-171 76-107 (196) 27 d1qopa_ c.1.2.4 (A:) Trp synth 49.1 6.5 0.00047 16.0 6.5 144 126-296 3-159 (267) 28 d1sg6a_ e.22.1.1 (A:) Dehydroq 48.7 6.5 0.00048 15.9 6.7 52 123-177 82-138 (389) 29 d1wsaa_ c.88.1.1 (A:) Asparagi 48.1 6.7 0.00049 15.9 6.3 70 123-194 62-135 (328) 30 d1i7qb_ c.23.16.1 (B:) Anthran 46.0 6.7 0.00049 15.9 2.7 55 127-194 36-90 (192) 31 d1agxa_ c.88.1.1 (A:) Glutamin 45.5 7.3 0.00053 15.6 6.6 60 124-185 64-127 (331) 32 d1xmpa_ c.23.8.1 (A:) N5-CAIR 44.7 7.5 0.00055 15.5 5.2 80 123-229 41-127 (155) 33 d1u11a_ c.23.8.1 (A:) N5-CAIR 44.6 7.5 0.00055 15.5 3.2 48 124-178 43-91 (159) 34 d2ciwa1 a.39.3.1 (A:0-119) Clo 42.7 3.7 0.00027 17.5 1.0 10 37-46 26-35 (120) 35 d1o7ja_ c.88.1.1 (A:) Asparagi 41.7 8.4 0.00061 15.2 7.3 70 123-194 64-137 (325) 36 d1byka_ c.93.1.1 (A:) Trehalos 39.1 9.2 0.00067 15.0 9.7 121 28-218 1-121 (255) 37 d1q6za3 c.36.1.9 (A:342-524) B 37.8 4.6 0.00033 16.9 0.8 32 140-171 79-110 (183) 38 d1o4va_ c.23.8.1 (A:) N5-CAIR 36.5 10 0.00073 14.7 3.2 80 124-230 41-121 (169) 39 d1qcza_ c.23.8.1 (A:) N5-CAIR 36.1 10 0.00074 14.7 4.3 49 123-178 41-90 (163) 40 d1ozha2 c.36.1.5 (A:7-187) Cat 35.4 10 0.00076 14.6 3.9 40 127-172 8-47 (181) 41 d1jyea_ c.93.1.1 (A:) Lac-repr 35.3 10 0.00076 14.6 11.2 126 32-224 3-128 (271) 42 d1vdra_ c.71.1.1 (A:) Dihydrof 35.0 11 0.00077 14.6 2.6 52 125-183 79-130 (157) 43 d1q6za2 c.36.1.5 (A:2-181) Ben 34.5 11 0.00079 14.5 2.9 27 127-153 4-30 (180) 44 d1u6ka1 c.127.1.1 (A:2-283) F4 31.9 12 0.00087 14.3 5.8 49 123-173 44-96 (282) 45 d1yzya1 c.146.1.1 (A:1-412) Hy 30.7 12 0.00091 14.1 4.5 27 126-152 60-89 (412) 46 d1tjya_ c.93.1.1 (A:) AI-2 rec 30.5 13 0.00092 14.1 17.2 97 28-180 2-98 (316) 47 d2d6fa2 c.88.1.1 (A:84-435) Gl 30.0 13 0.00093 14.0 7.3 61 123-185 66-129 (352) 48 d1ig3a2 c.100.1.1 (A:10-178) T 29.3 13 0.00096 14.0 7.9 127 19-173 18-167 (169) 49 d1wl8a1 c.23.16.1 (A:1-188) GM 28.0 14 0.001 13.8 2.5 50 132-194 37-86 (188) 50 d1k92a1 c.26.2.1 (A:1-188) Arg 27.8 12 0.00086 14.3 1.5 43 21-71 2-44 (188) 51 d1pvda2 c.36.1.5 (A:2-181) Pyr 27.5 14 0.001 13.8 3.6 81 127-236 6-86 (180) 52 d2ez9a2 c.36.1.5 (A:9-182) Pyr 27.0 14 0.001 13.7 5.9 41 128-172 7-47 (174) 53 d1b5ta_ c.1.23.1 (A:) Methylen 26.8 15 0.0011 13.7 3.7 76 50-149 23-101 (275) 54 d2pjua1 c.92.3.1 (A:11-196) Pr 26.2 15 0.0011 13.6 9.7 110 125-290 38-147 (186) 55 d2ji7a2 c.36.1.5 (A:7-194) Oxa 26.1 15 0.0011 13.6 5.4 40 127-172 7-46 (188) 56 d1q7ra_ c.23.16.1 (A:) Hypothe 24.6 16 0.0012 13.4 4.4 34 25-67 2-35 (202) 57 d1kp0a1 c.55.2.1 (A:1-156) Cre 24.4 16 0.0012 13.4 2.8 24 125-148 26-49 (156) 58 d1iv0a_ c.55.3.8 (A:) Hypothet 24.2 16 0.0012 13.4 3.4 28 155-182 41-68 (98) 59 d1nnsa_ c.88.1.1 (A:) Asparagi 23.9 16 0.0012 13.3 7.4 68 124-193 63-132 (326) 60 d1efpb_ c.26.2.3 (B:) Small, b 23.8 17 0.0012 13.3 6.2 53 128-181 69-128 (246) 61 d1v93a_ c.1.23.1 (A:) Methylen 23.7 17 0.0012 13.3 3.7 82 43-149 27-110 (292) 62 d2djia2 c.36.1.5 (A:3-186) Pyr 22.9 17 0.0013 13.2 2.5 26 128-153 8-33 (184) 63 d1f0ka_ c.87.1.2 (A:) Peptidog 22.4 18 0.0013 13.2 11.1 115 30-173 1-119 (351) 64 d1iowa1 c.30.1.2 (A:1-96) D-Al 21.6 18 0.0013 13.1 4.7 39 27-67 1-40 (96) 65 d1chma1 c.55.2.1 (A:2-156) Cre 21.3 18 0.0013 13.0 3.0 23 125-147 25-47 (155) 66 d2c1xa1 c.87.1.10 (A:7-456) UD 20.6 19 0.0014 12.9 3.6 24 40-65 10-33 (450) 67 d1lbaa_ d.118.1.1 (A:) Bacteri 20.1 20 0.0014 12.9 4.1 35 152-192 97-131 (146) No 1 >d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Probab=100.00 E-value=0 Score=629.57 Aligned_cols=360 Identities=21% Similarity=0.252 Sum_probs=302.1 Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCC Q ss_conf 76337999836877514899999999999985699789998383660107991304626988887464078740033678 Q gi|254780227|r 27 MVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRV 106 (426) Q Consensus 27 ~~~krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~ 106 (426) ....|||||||||||||||++|+|++++++.++++++||||++||+||++++++ +++++.++.|.++||+.|++||. T Consensus 67 ~~~~rIgIl~sGG~aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~---~L~~~~v~~~~~~GG~~l~~s~r 143 (550) T d2f48a1 67 SKALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKI---ELTESLINSYRNTGGFDIVSSGR 143 (550) T ss_dssp CSCCEEEEEEBSSCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEE---EECHHHHHHHTTCCSSTTTCCBC T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEE---ECCHHHHHHHHHCCCCEECCCCC T ss_conf 898779998967872889999999999999858998999988503886489879---89999983487279907217999 Q ss_pred CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC--C Q ss_conf 88653011101234567456999999998639988999488257899999999998518996288522223477222--1 Q gi|254780227|r 107 KLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIP--I 184 (426) Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~--t 184 (426) ..+ ++++++++++++|++++||+||+||||||+++|+.|+|++++++++|+||||||||||||++ | T Consensus 144 ~~~------------~~~e~~~~i~~~l~~~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~ 211 (550) T d2f48a1 144 TKI------------ETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHI 211 (550) T ss_dssp CCC------------CSHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSC T ss_pred CCC------------CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC T ss_conf 997------------67788899999998648887999898379999999999999718996289702443678777655 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 14633565999999999999987751666169999769874289999874014332310111111100014576523287 Q gi|254780227|r 185 HQSLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLP 264 (426) Q Consensus 185 d~tiGfdTA~~~~a~~i~~l~~~A~s~~~~~~iVEvMGR~aG~LAl~~ala~ga~~~~i~~~~~~~~~~~~~~~d~iliP 264 (426) |+|||||||+++++++|++++.||.|++++|||||||||+|||||++||||++|+ +|+|| T Consensus 212 d~s~GfdTA~~~~~~~i~~l~~da~S~~~~~~~VevMGR~aG~lAl~~alat~a~--------------------~ilip 271 (550) T d2f48a1 212 EISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASHVALECALKTHPN--------------------ICIVS 271 (550) T ss_dssp CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCTTSCHHHHHHHHHHCCS--------------------EECCH T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCC--------------------EEEEC T ss_conf 6654277899999999999998876435634899980687718899999861886--------------------59833 Q ss_pred CCCCC----H----HHHHHHHHH-HHHCCCCEEEEEECCCCCCCCHHH-------------------------------- Q ss_conf 86559----8----999999999-850289538995042111111012-------------------------------- Q gi|254780227|r 265 EMSFN----L----EVEIERLSK-VMEKKGSVAIFVSEGACRDVIMDN-------------------------------- 303 (426) Q Consensus 265 E~~~~----~----~~~~~~i~~-~~~~~~~~vIVvsEG~~~~~~~~~-------------------------------- 303 (426) |.+++ + +.++..+.+ ...+++|++|+||||+.....+-. T Consensus 272 E~~~~~~~~L~~i~~~i~~~I~kR~~~gk~~gvIvV~EGli~~ipe~~~Li~el~~~l~~~~~~~~~~~~~~~~~~~~~~ 351 (550) T d2f48a1 272 EEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAK 351 (550) T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSHHHHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHH T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH T ss_conf 64464010178999999999999997289838999547321036678899999987654023210122201234455542 Q ss_pred -----------------HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----------CEEEECCCCCCCCCC Q ss_conf -----------------32011222223444544355664899999999871874----------318841886123558 Q gi|254780227|r 304 -----------------RLSSGEKIKRDSFGHILLDKMNVGSWFADKFANMIKAE----------RSIVQKSGYFARSAP 356 (426) Q Consensus 304 -----------------~~~~~~~~~~d~~g~~~l~~~~i~~~La~~i~~~~~~~----------~~~~~~lGy~qRgg~ 356 (426) .+......++|+|||++++.++++++|++++++++..+ ...++.+||+|||+. T Consensus 352 ls~~~~~l~~~lp~~i~~qll~~~~~rD~~G~~~ls~I~~e~lLa~~V~~~L~~~~~~~~~~~~f~~~~h~~GYe~R~a~ 431 (550) T d2f48a1 352 LSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAF 431 (550) T ss_dssp SCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHHHHHHHHHHHHHTTTCCCSCCCEEEEEESHHHHTSC T ss_pred CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCC T ss_conf 01344444302617788887530136488888633454577999999999998766403344312454426653231779 Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----EEEEEEEHHHHCC-------------CCCCCCCHHHHHHH Q ss_conf 98679999999999999999779986699998598-----6996430898526-------------88207775899999 Q gi|254780227|r 357 SGSEDLSLIKKMVVLAVDSAISGISGVTGEDEREN-----NILRIIKFEDIRG-------------GRVFDTNTPWFSDI 418 (426) Q Consensus 357 Ps~~Dr~~a~~lG~~Av~~~~~G~sgvmv~i~~~~-----~~~~~i~~~~i~~-------------~k~vd~~~~~~~~~ 418 (426) ||+||+.||++||+.||+++++|+||+|+++++.+ +....+|+..+.+ +..||+++..|+.+ T Consensus 432 PS~fD~~~a~~lG~~Av~~~~~G~tG~M~~I~~l~~~~~~w~~~~iPl~~~m~~e~r~g~~~~~i~k~~v~l~~~~f~~~ 511 (550) T d2f48a1 432 PSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEERYGEKKPVIKKALVDLEGRPFKEF 511 (550) T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEEEEGGGGEEEEEETTEEEEEECCCCCCTTSHHHHHH T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEECCEECCCCHHHHHH T ss_conf 99899999999999999999769988799884798897214887856899950787469867533055268886899999 Q ss_pred HHH Q ss_conf 984 Q gi|254780227|r 419 LRH 421 (426) Q Consensus 419 l~~ 421 (426) ... T Consensus 512 ~~~ 514 (550) T d2f48a1 512 VKN 514 (550) T ss_dssp HHH T ss_pred HHH T ss_conf 999 No 2 >d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Probab=100.00 E-value=0 Score=613.44 Aligned_cols=310 Identities=23% Similarity=0.305 Sum_probs=278.2 Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 37999836877514899999999999985699789998383660107991304626988887464078740033678886 Q gi|254780227|r 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLT 109 (426) Q Consensus 30 krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~~~ 109 (426) ||||||||||||||||++|+++++++.. .+++|||+++||+||++++++ +++++++..|.++|||+|||||++++ T Consensus 2 krIaIl~sGG~~pgiNa~i~~~v~~~~~--~~~~v~g~~~G~~Gl~~~~~~---~l~~~~~~~~~~~gGt~lgs~r~~~~ 76 (319) T d4pfka_ 2 KRIGVLTSGGDSPGMNAAIRSVVRKAIY--HGVEVYGVYHGYAGLIAGNIK---KLEVGDVGDIIHRGGTILYTARCPEF 76 (319) T ss_dssp CEEEEEEESSCCTTHHHHHHHHHHHHHH--TTCEEEEESSHHHHHHTTCEE---EECGGGGTTCTTCCSCTTCCCCCTTS T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHCCCCCC---CCCHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 8899987688768999999999999987--799999983166875679951---59989998798648630035888865 Q ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC Q ss_conf 53011101234567456999999998639988999488257899999999998518996288522223477222114633 Q gi|254780227|r 110 NFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLG 189 (426) Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiG 189 (426) . .++.+++++++|++++||+|++|||||||++|++|+++ +++||||||||||||++||+||| T Consensus 77 ~------------~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td~t~G 138 (319) T d4pfka_ 77 K------------TEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTDFTIG 138 (319) T ss_dssp S------------SHHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCSSCBT T ss_pred C------------CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHC------CCCEEEEEEECCCCCCCCCCCCC T ss_conf 5------------41004469999998336638995383689999998733------67555221021688678566310 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 56599999999999998775166616999976987428999987401433231011111110001457652328786559 Q gi|254780227|r 190 ALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFN 269 (426) Q Consensus 190 fdTA~~~~a~~i~~l~~~A~s~~~~~~iVEvMGR~aG~LAl~~ala~ga~~~~i~~~~~~~~~~~~~~~d~iliPE~~~~ 269 (426) |+||++++++++++++.||.|+ +||||||+|||+|||||++++||++| |++||||.||+ T Consensus 139 f~TA~~~~~~~i~~l~~~a~s~-~rv~ivEvMGR~aG~lA~~~~la~~a--------------------~~iliPE~~~~ 197 (319) T d4pfka_ 139 FDTALNTVIDAIDKIRDTATSH-ERTYVIEVMGRHAGDIALWSGLAGGA--------------------ETILIPEADYD 197 (319) T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTTC--------------------SEEECTTSCCC T ss_pred HHHHHHHHHHHHHHHHHHCCCC-CCEEEEEECCCCCCHHHHHHHCCCCC--------------------CEEEECCCCCC T ss_conf 8999999999999987430567-64699996688886899985455787--------------------68985477998 Q ss_pred HHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC Q ss_conf 89999999998502-89538995042111111012320112222234445443556648999999998718743188418 Q gi|254780227|r 270 LEVEIERLSKVMEK-KGSVAIFVSEGACRDVIMDNRLSSGEKIKRDSFGHILLDKMNVGSWFADKFANMIKAERSIVQKS 348 (426) Q Consensus 270 ~~~~~~~i~~~~~~-~~~~vIVvsEG~~~~~~~~~~~~~~~~~~~d~~g~~~l~~~~i~~~La~~i~~~~~~~~~~~~~l 348 (426) ++++++.+++++++ +++++||+|||+.. +..+.+.+++..+.+ +|+..| T Consensus 198 ~~~~~~~i~~~~~~~k~~~ivvvsEG~~~-----------------------------~~~~~~~i~~~~g~~-~r~~~l 247 (319) T d4pfka_ 198 MNDVIARLKRGHERGKKHSIIIVAEGVGS-----------------------------GVDFGRQIQEATGFE-TRVTVL 247 (319) T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEETTTCC-----------------------------HHHHHHHHHHHHCCC-EEEEEC T ss_pred HHHHHHHHHHHHHHCCCEEEEEEECCCCH-----------------------------HHHHHHHHHHHCCCE-EEEEEC T ss_conf 78889999988862687138998335320-----------------------------134665566534962-688524 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHCCCCCCCCCHHHHH Q ss_conf 86123558986799999999999999997799866999985986996430898526882077758999 Q gi|254780227|r 349 GYFARSAPSGSEDLSLIKKMVVLAVDSAISGISGVTGEDERENNILRIIKFEDIRGGRVFDTNTPWFS 416 (426) Q Consensus 349 Gy~qRgg~Ps~~Dr~~a~~lG~~Av~~~~~G~sgvmv~i~~~~~~~~~i~~~~i~~~k~vd~~~~~~~ 416 (426) ||+|||+.||++||.+|++||..||+++++|+||+|++++++++.++|++ +.+...|++|++ ||. T Consensus 248 G~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g~sg~mv~i~~~~~~~vpl~-~v~~~~k~v~~~--l~~ 312 (319) T d4pfka_ 248 GHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNNQLVDHDIA-EALANKHTIDQR--MYA 312 (319) T ss_dssp GGGGGCSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEEEHH-HHTTSCCCCCHH--HHH T ss_pred CCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECHH-HHHHCCCCCCHH--HHH T ss_conf 70003799888999999999999999997699985999999999987399-997167779999--999 No 3 >d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=0 Score=609.89 Aligned_cols=314 Identities=25% Similarity=0.313 Sum_probs=276.8 Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 37999836877514899999999999985699789998383660107991304626988887464078740033678886 Q gi|254780227|r 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLT 109 (426) Q Consensus 30 krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~~~ 109 (426) ||||||||||||||||++|+++++++.. ++++||||++||+||++++++ +++++.+++|.++|||+|||||++++ T Consensus 3 krIgIltsGG~~pg~Na~i~~~v~~~~~--~~~~v~g~~~G~~Gl~~~~~~---~l~~~~v~~~~~~gGs~lgt~R~~~~ 77 (320) T d1pfka_ 3 KKIGVLTSGGDAPGMNAAIRGVVRSALT--EGLEVMGIYDGYLGLYEDRMV---QLDRYSVSDMINRGGTFLGSARFPEF 77 (320) T ss_dssp CEEEEEECSSCCTTHHHHHHHHHHHHHH--TTCEEEEESTHHHHHHTTCEE---EECSGGGTTCTTCCSCTTCCCCCGGG T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHCCCCEE---ECCHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 6499986688866889999999999987--899899994668887279857---29999998898469985231478877 Q ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC Q ss_conf 53011101234567456999999998639988999488257899999999998518996288522223477222114633 Q gi|254780227|r 110 NFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLG 189 (426) Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiG 189 (426) . +++..++++++|++++||+|++||||||+++|++|+++ .++|||||||||||+++||+||| T Consensus 78 ~------------~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~l~~~------~~~vigiPkTIDNDl~~td~s~G 139 (320) T d1pfka_ 78 R------------DENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEM------GFPCIGLPGTIDNDIKGTDYTIG 139 (320) T ss_dssp G------------SHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCTTCCCTTCSCCBT T ss_pred C------------CHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHC------CCCEEEEEEEECCCCCCCCCCCC T ss_conf 6------------65555038889987699889996796589999998751------66522230143178888678883 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 56599999999999998775166616999976987428999987401433231011111110001457652328786559 Q gi|254780227|r 190 ALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFN 269 (426) Q Consensus 190 fdTA~~~~a~~i~~l~~~A~s~~~~~~iVEvMGR~aG~LAl~~ala~ga~~~~i~~~~~~~~~~~~~~~d~iliPE~~~~ 269 (426) |+||++++++++++++.+|. +|+||||||+|||+|||||++++||++| |++||||.||+ T Consensus 140 f~TA~~~~~~~i~~l~~~a~-s~~rv~ivEvMGR~~G~la~~~ala~~a--------------------~~iliPE~~~~ 198 (320) T d1pfka_ 140 FFTALSTVVEAIDRLRDTSS-SHQRISVVEVMGRYCGDLTLAAAIAGGC--------------------EFVVVPEVEFS 198 (320) T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTCEEEEEECCTTCCHHHHHHHHHTTC--------------------SEEECTTSCCC T ss_pred HHHHHHHHHHHHHHHHHHCC-CCCCEEEEEEECCCHHHHHHHHHHCCCC--------------------CEEECCCCCCC T ss_conf 48899999999999864014-7873899996256126899985410477--------------------56842788999 Q ss_pred HHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC Q ss_conf 8999999999850-289538995042111111012320112222234445443556648999999998718743188418 Q gi|254780227|r 270 LEVEIERLSKVME-KKGSVAIFVSEGACRDVIMDNRLSSGEKIKRDSFGHILLDKMNVGSWFADKFANMIKAERSIVQKS 348 (426) Q Consensus 270 ~~~~~~~i~~~~~-~~~~~vIVvsEG~~~~~~~~~~~~~~~~~~~d~~g~~~l~~~~i~~~La~~i~~~~~~~~~~~~~l 348 (426) ++.+++.+++++. .+++++||+|||... ...+++.+++.++.+ .|+..| T Consensus 199 ~~~~~~~i~~~~~~~~~~~iivvsEg~~~-----------------------------~~~~~~~i~~~~g~~-~r~~~l 248 (320) T d1pfka_ 199 REDLVNEIKAGIAKGKKHAIVAITEHMCD-----------------------------VDELAHFIEKETGRE-TRATVL 248 (320) T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEESSSSC-----------------------------HHHHHHHHHHHHSSC-EEEEEC T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCC-----------------------------CHHHHHHHHHHHCCC-EEECCC T ss_conf 89999999998852799611896145444-----------------------------304899999871960-365243 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEHHHHCCCCCCCCCHHHHHHHHH Q ss_conf 861235589867999999999999999977998669999859869964308985268820777589999998 Q gi|254780227|r 349 GYFARSAPSGSEDLSLIKKMVVLAVDSAISGISGVTGEDERENNILRIIKFEDIRGGRVFDTNTPWFSDILR 420 (426) Q Consensus 349 Gy~qRgg~Ps~~Dr~~a~~lG~~Av~~~~~G~sgvmv~i~~~~~~~~~i~~~~i~~~k~vd~~~~~~~~~l~ 420 (426) ||+|||++|+++||.+|++||+.||+++++|++|+||+++++++.++|++ +.+.+.|. |..++|.++.. T Consensus 249 G~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~G~~g~mvg~~~~~~~~~pl~-~~v~~~k~--~~~~~~~~~a~ 317 (320) T d1pfka_ 249 GHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDII-DAIENMKR--PFKGDWLDCAK 317 (320) T ss_dssp GGGGGCSCCCHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETTEEEEEEHH-HHHHHCCC--CCCHHHHHHHH T ss_pred CHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECHH-HHHHCCCC--CCCHHHHHHHH T ss_conf 16550799988999999999999999997799986999999998981699-99831787--99599999999 No 4 >d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Probab=95.50 E-value=0.04 Score=30.23 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=57.3 Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HHHHHHHHCCCCCE-EEEECCCCCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 745699999999863998899948825789999-99999985189962-8852222347722211463356599999999 Q gi|254780227|r 123 DENPLEVSAHHLMQSGVTILHTIGGDDTNTTAC-DLLRYLKEKNYNIT-VVGLPKTIDNDIIPIHQSLGALTAAQVSACF 200 (426) Q Consensus 123 ~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~-~L~e~~~~~~~~i~-vigiPKTIDNDi~~td~tiGfdTA~~~~a~~ 200 (426) ...+..++++.+.+.+.|.+++.|||||...+. .|.+ ..+...+ +--+|.==-||+. .++|..+....+ T Consensus 38 ~~g~a~~~~~~~~~~~~d~Ivv~GGDGTv~ev~~gl~~---~~~~~~p~lgilP~GTgN~~A---r~lg~~~~~~~a--- 108 (295) T d2bona1 38 EKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQ---CEGDDIPALGILPLGTANDFA---TSVGIPEALDKA--- 108 (295) T ss_dssp STTHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHH---CCSSCCCEEEEEECSSSCHHH---HHTTCCSSHHHH--- T ss_pred CCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH---CCCCCCCEEEEEECCCCCCHH---HHCCCCCCHHHH--- T ss_conf 83459999999986699789997798279899987875---067889659999778665308---774998424666--- Q ss_pred HHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 999998775166616999976987 Q gi|254780227|r 201 FDNISNERSATPRSLIIHEVMGRN 224 (426) Q Consensus 201 i~~l~~~A~s~~~~~~iVEvMGR~ 224 (426) ++.+.. ...+++-+.++-++. T Consensus 109 ~~~i~~---g~~~~id~~~v~~~~ 129 (295) T d2bona1 109 LKLAIA---GDAIAIDMAQVNKQT 129 (295) T ss_dssp HHHHHH---SEEEEEEEEEETTSC T ss_pred HHHHCC---CCEEEEEEEEEECCE T ss_conf 642035---625985400341000 No 5 >d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Probab=95.15 E-value=0.027 Score=31.36 Aligned_cols=88 Identities=20% Similarity=0.192 Sum_probs=56.8 Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH Q ss_conf 45699999999863998899948825789999999999851899628852222347722211463356599999999999 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDN 203 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i~~ 203 (426) ..+....++.+...+.|.+++.|||||...+..- +..++..+++.-+|.==-||+. .++|.......+ ++. T Consensus 44 ~~~~~~~~~~~~~~~~d~ivv~GGDGTv~~v~~~---l~~~~~~~~l~iiP~GTgN~~a---r~l~~~~~~~~a---l~~ 114 (312) T d2qv7a1 44 IGDATLEAERAMHENYDVLIAAGGDGTLNEVVNG---IAEKPNRPKLGVIPMGTVNDFG---RALHIPNDIMGA---LDV 114 (312) T ss_dssp TTHHHHHHHHHTTTTCSEEEEEECHHHHHHHHHH---HTTCSSCCEEEEEECSSCCHHH---HHTTCCSSHHHH---HHH T ss_pred CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH---HHHHCCCCCEEEEECCCCCCCH---HHCCCCCHHHHH---HHH T ss_conf 2279999998877699889998678479999999---9753556636875368887504---422466149999---975 Q ss_pred HHHHHHHCCCCEEEEEECCC Q ss_conf 99877516661699997698 Q gi|254780227|r 204 ISNERSATPRSLIIHEVMGR 223 (426) Q Consensus 204 l~~~A~s~~~~~~iVEvMGR 223 (426) +. + ...+++-+.++=+| T Consensus 115 ~~-~--~~~~~id~~~v~~~ 131 (312) T d2qv7a1 115 II-E--GHSTKVDIGKMNNR 131 (312) T ss_dssp HH-H--TCEEEEEEEEETTE T ss_pred HH-C--CCCEEECCCCCCCC T ss_conf 51-3--98189664346764 No 6 >d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Probab=94.55 E-value=0.029 Score=31.15 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=24.5 Q ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECC Q ss_conf 99889994882578999999999985189962885222 Q gi|254780227|r 138 GVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPK 175 (426) Q Consensus 138 ~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPK 175 (426) +.|.++++|||||+-.|.+.. ...+||+||.- T Consensus 39 ~~D~vi~iGGDGT~L~a~~~~------~~~~PilGIn~ 70 (249) T d1z0sa1 39 NFDFIVSVGGDGTILRILQKL------KRCPPIFGINT 70 (249) T ss_dssp GSSEEEEEECHHHHHHHHTTC------SSCCCEEEEEC T ss_pred CCCEEEEECCCHHHHHHHHHH------CCCCCEEEECC T ss_conf 799999987819999999983------67994899775 No 7 >d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Probab=94.37 E-value=0.02 Score=32.22 Aligned_cols=56 Identities=27% Similarity=0.474 Sum_probs=37.4 Q ss_pred HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH--HHHHHHHHHH Q ss_conf 6399889994882578999999999985189962885222234772221146335659999--9999999998 Q gi|254780227|r 136 QSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQV--SACFFDNISN 206 (426) Q Consensus 136 ~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~--~a~~i~~l~~ 206 (426) ..++|.+|++|||||+-.|..... ..++||+||-- =++||-|..+. ..++++++.. T Consensus 69 ~~~~Dlvi~lGGDGT~L~a~~~~~-----~~~~PilGin~----------G~lGFL~~~~~~~~~~~l~~~~~ 126 (302) T d1u0ta_ 69 ADGCELVLVLGGDGTFLRAAELAR-----NASIPVLGVNL----------GRIGFLAEAEAEAIDAVLEHVVA 126 (302) T ss_dssp ---CCCEEEEECHHHHHHHHHHHH-----HHTCCEEEEEC----------SSCCSSCSEEGGGHHHHHHHHHH T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-----CCCCEEEEECC----------CCCCEECCCCHHHHHHHHHHHHH T ss_conf 346558999758739999999740-----03982898378----------86305414545678999999874 No 8 >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} Probab=93.14 E-value=0.22 Score=25.46 Aligned_cols=58 Identities=16% Similarity=0.214 Sum_probs=46.0 Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHC---------------CCCCEEEEECCCCCCCC Q ss_conf 45699999999863998899948825789999999999851---------------89962885222234772 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEK---------------NYNITVVGLPKTIDNDI 181 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~---------------~~~i~vigiPKTIDNDi 181 (426) .++.+++++.+++.+.|.+|.|||.-++..|..++-..... ...+|+|.||-|--++- T Consensus 73 ~~~v~~~~~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgs 145 (385) T d1rrma_ 73 ITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAA 145 (385) T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCT T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCC T ss_conf 8999988654303588889866988422699999999638753026665043222478774674366544643 No 9 >d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} Probab=92.55 E-value=0.23 Score=25.34 Aligned_cols=57 Identities=7% Similarity=0.035 Sum_probs=44.7 Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHC-------------CCCCEEEEECCCCCCC Q ss_conf 45699999999863998899948825789999999999851-------------8996288522223477 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEK-------------NYNITVVGLPKTIDND 180 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~-------------~~~i~vigiPKTIDND 180 (426) .++.+++++.+++.+.|.+|.+||.-++..|..++...... ...+|+|.||-|--+. T Consensus 78 ~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtg 147 (398) T d1vlja_ 78 LSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATG 147 (398) T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSC T ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCCC T ss_conf 8999987641145667668844886311278888988641455677643664436778733541465443 No 10 >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Probab=91.92 E-value=0.25 Score=25.06 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=45.2 Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHC-------------CCCCEEEEECCCCCCCC Q ss_conf 45699999999863998899948825789999999999851-------------89962885222234772 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEK-------------NYNITVVGLPKTIDNDI 181 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~-------------~~~i~vigiPKTIDNDi 181 (426) .+..+++++.+++.+.|.+|.+||.-+++.|..++-..... ...+|+|.||-|--++- T Consensus 72 ~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgs 142 (359) T d1o2da_ 72 FDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGS 142 (359) T ss_dssp HHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCG T ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCH T ss_conf 89998764200135775688516642001899999998489971331167534457787588426455422 No 11 >d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Probab=91.38 E-value=0.39 Score=23.87 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=42.7 Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC Q ss_conf 4569999999986399889994882578999999999985189962885222234772 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi 181 (426) .+..+++.+.+++.+.|.+|.+||--++..|..++.. .++|+|.||=|--.+- T Consensus 71 ~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~iA~~-----~~~p~i~IPTT~gtgs 123 (366) T d1jq5a_ 71 RNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADE-----LDAYIVIVPTAASTDA 123 (366) T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHH-----HTCEEEEEESSCCSSC T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHEEEEC-----CCCEEEEHHHHHHHHH T ss_conf 9999999998620388689981688644220001204-----6653540243443432 No 12 >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Probab=89.89 E-value=0.52 Score=23.02 Aligned_cols=116 Identities=19% Similarity=0.159 Sum_probs=71.6 Q ss_pred CCCCEEEEEEEECCCC----CHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCC Q ss_conf 4876337999836877----514899999999999985699789998383660107991304626988887464078740 Q gi|254780227|r 25 KDMVAHKVAFLTAGGI----APCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSP 100 (426) Q Consensus 25 ~~~~~krI~IltsGG~----aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~ 100 (426) ++...|||.||=||.- +--..-+...++++++.. |++++-+ +.++..+.- +++..+.+ T Consensus 3 ~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~ili--------N~NP~TVst-d~d~aD~l------- 64 (127) T d1a9xa3 3 KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINV--------NSNPATIMT-DPEMADAT------- 64 (127) T ss_dssp CCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEE--------CSCTTCGGG-CGGGSSEE------- T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC--CCEEEEE--------CCCHHHHHC-CHHHCCEE------- T ss_conf 87788779998888470266301578999999999976--9847984--------586675315-86550214------- Q ss_pred CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHHHHHHHHHCCCCCEEEEEC-CCCC Q ss_conf 0336788865301110123456745699999999863998899-9488257899999999998518996288522-2234 Q gi|254780227|r 101 IGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILH-TIGGDDTNTTACDLLRYLKEKNYNITVVGLP-KTID 178 (426) Q Consensus 101 LgtsR~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li-~IGGdgS~~~a~~L~e~~~~~~~~i~vigiP-KTID 178 (426) |. .+-..+.+.+.+++-+.|+++ ..||--.+..+..|.+...-++++++++|.+ ++|| T Consensus 65 -----------------Yf---ePlt~e~v~~Ii~~E~pd~il~~~GGQtalnla~~L~~~giL~~~~v~iLGt~~~sId 124 (127) T d1a9xa3 65 -----------------YI---EPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAID 124 (127) T ss_dssp -----------------EC---SCCCHHHHHHHHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHH T ss_pred -----------------EE---ECCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHCCCHHHCCCEEECCCHHHHH T ss_conf -----------------65---3488999999999857687698760030867899998858377669858789999999 No 13 >d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]} Probab=88.44 E-value=0.48 Score=23.25 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=11.4 Q ss_pred CCEEEEEECCC-CCCHHHHHH Q ss_conf 61699997698-742899998 Q gi|254780227|r 213 RSLIIHEVMGR-NCGWLTAYS 232 (426) Q Consensus 213 ~~~~iVEvMGR-~aG~LAl~~ 232 (426) +++.+|=+||- |.||++|.- T Consensus 30 ~~i~~VPTMGaLH~GHlsLi~ 50 (286) T d2a84a1 30 RRVMLVPTMGALHEGHLALVR 50 (286) T ss_dssp CCEEEEEECSSCCHHHHHHHH T ss_pred CEEEEEECCCCHHHHHHHHHH T ss_conf 908999388634189999999 No 14 >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} Probab=87.59 E-value=0.75 Score=22.02 Aligned_cols=56 Identities=14% Similarity=0.058 Sum_probs=41.1 Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH----------------HCCCCCEEEEECCCCCC Q ss_conf 456999999998639988999488257899999999998----------------51899628852222347 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLK----------------EKNYNITVVGLPKTIDN 179 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~----------------~~~~~i~vigiPKTIDN 179 (426) .+..+.+++.+++.+.|.+|.+||--++..|..++-... .....+|+|.||-|--. T Consensus 74 ~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagt 145 (390) T d1oj7a_ 74 YETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPAT 145 (390) T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSS T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC T ss_conf 999999999976337877985478854408999999751874300344312466433467873335665443 No 15 >d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]} Probab=85.54 E-value=0.75 Score=22.02 Aligned_cols=29 Identities=10% Similarity=0.118 Sum_probs=13.8 Q ss_pred CCCEEEEEECCC-CCCHHHHHHHHHCCCCC Q ss_conf 661699997698-74289999874014332 Q gi|254780227|r 212 PRSLIIHEVMGR-NCGWLTAYSAHCYLNMI 240 (426) Q Consensus 212 ~~~~~iVEvMGR-~aG~LAl~~ala~ga~~ 240 (426) .+++.+|=|||- |.||++|.-.-...++. T Consensus 21 g~~ig~VPTMGaLH~GHlsLi~~A~~~~~~ 50 (282) T d1ihoa_ 21 GKRVALVPTMGNLHDGHMKLVDEAKARADV 50 (282) T ss_dssp TCCEEEEEECSCCCHHHHHHHHHHHHHCSE T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCC T ss_conf 990999828750548999999999874896 No 16 >d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} Probab=70.79 E-value=2.7 Score=18.42 Aligned_cols=51 Identities=24% Similarity=0.279 Sum_probs=36.7 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC Q ss_conf 569999999986399889994882578999999999985189962885222234772 Q gi|254780227|r 125 NPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 (426) Q Consensus 125 ~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi 181 (426) ..++++ ..+.+.+.|.+|.+||--.+..|..++- ..++|+|.||=|--++- T Consensus 71 ~~i~~~-~~~~~~~~D~IIavGGGs~~D~aK~ia~-----~~~~P~I~IPTTa~tgs 121 (364) T d1kq3a_ 71 EEIERL-SGLVEEETDVVVGIGGGKTLDTAKAVAY-----KLKKPVVIVPTIASTDA 121 (364) T ss_dssp HHHHHH-HTTCCTTCCEEEEEESHHHHHHHHHHHH-----HTTCCEEEEESSCCCSC T ss_pred HHHHHH-HHHHHCCCCEEEEECCCCCCEEECCCCC-----CCCCCCEEECCCCCCCC T ss_conf 799999-9975205768998136754101012233-----34210124225433332 No 17 >d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]} Probab=68.67 E-value=3 Score=18.13 Aligned_cols=25 Identities=4% Similarity=-0.061 Sum_probs=11.1 Q ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 22223477222114633565999999 Q gi|254780227|r 173 LPKTIDNDIIPIHQSLGALTAAQVSA 198 (426) Q Consensus 173 iPKTIDNDi~~td~tiGfdTA~~~~a 198 (426) .|+.+++-+.|. +-+|+...+-+++ T Consensus 104 ~~~~l~~~leG~-~RPgHF~GV~tVV 128 (276) T d1v8fa_ 104 VEGPLTALWEGA-VRPGHFQGVATVV 128 (276) T ss_dssp ECSHHHHSTHHH-HSTTHHHHHHHHH T ss_pred ECCCCCCCCCCC-CCCCHHHHHHHHH T ss_conf 635335556689-8971377899999 No 18 >d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]} Probab=67.79 E-value=3.1 Score=18.02 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=38.8 Q ss_pred CHHHHHHHHHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC Q ss_conf 74569999999986399---88999488257899999999998518996288522223 Q gi|254780227|r 123 DENPLEVSAHHLMQSGV---TILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTI 177 (426) Q Consensus 123 ~~~~~~~~~~~l~~~~I---d~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTI 177 (426) +-+.++++.+.+.+.++ +.++.|||--..+.|--.|.. ..-+++.|.||-|. T Consensus 66 sl~~~~~i~~~l~~~~~~r~~~iiaiGGG~v~D~agf~A~~---y~rgi~~i~vPTtl 120 (347) T d1ujna_ 66 SLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAAT---YLRGVAYLAFPTTT 120 (347) T ss_dssp SHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHHHH---BTTCCEEEEEECSH T ss_pred CHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH---HCCCCCEEECCCHH T ss_conf 99999999999997320356533686033233578887654---31785034036514 No 19 >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Probab=67.06 E-value=3.2 Score=17.93 Aligned_cols=109 Identities=18% Similarity=0.112 Sum_probs=60.2 Q ss_pred CCEEEEEEEECCCCCHH----HHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCC Q ss_conf 76337999836877514----89999999999998569978999838366010799130462698888746407874003 Q gi|254780227|r 27 MVAHKVAFLTAGGIAPC----LSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIG 102 (426) Q Consensus 27 ~~~krI~IltsGG~aPG----~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~Lg 102 (426) ..+|||.||=||.--=| ..-+....+++++.. |.+++-+ +.++..+.- +++..+.+ T Consensus 2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~Ili--------N~NPeTVst-d~d~aD~l--------- 61 (121) T d1a9xa4 2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMV--------NCNPETVST-DYDTSDRL--------- 61 (121) T ss_dssp SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEE--------CCCTTSSTT-STTSSSEE--------- T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC--CCEEEEE--------ECCHHHHHC-CHHHCCCE--------- T ss_conf 988779998778471166300208899999999966--9847997--------167665306-86444864--------- Q ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEE-ECCHHHHHHHHHHHHHHHHCCCCCEEEEE-CCCCCC Q ss_conf 367888653011101234567456999999998639988999-48825789999999999851899628852-222347 Q gi|254780227|r 103 NSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHT-IGGDDTNTTACDLLRYLKEKNYNITVVGL-PKTIDN 179 (426) Q Consensus 103 tsR~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~-IGGdgS~~~a~~L~e~~~~~~~~i~vigi-PKTIDN 179 (426) |.. +-..+.+.+.+++-+.+++++ .|| +++..|+..+.+. +++++|. |.+||. T Consensus 62 ---------------Yfe---plt~e~v~~Ii~~E~p~~ii~~~GG----Qtalnla~~L~~~--gv~iLGt~~~~Id~ 116 (121) T d1a9xa4 62 ---------------YFE---PVTLEDVLEIVRIEKPKGVIVQYGG----QTPLKLARALEAA--GVPVIGTSPDAIDR 116 (121) T ss_dssp ---------------ECC---CCSHHHHHHHHHHHCCSEEECSSST----HHHHTTHHHHHHT--TCCBCSSCHHHHHH T ss_pred ---------------EEC---CCCHHHHHHHHHHHCCCEEEEEHHH----HHHHHHHHHHHHC--CCCEECCCHHHHHH T ss_conf ---------------881---5889999999997699879953321----3177899999996--99488979999989 No 20 >d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Probab=64.08 E-value=3.7 Score=17.56 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=37.2 Q ss_pred CCCCEEEEECCHHH--HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 39988999488257--899999999998518996288522223477222114633565999999999999987751 Q gi|254780227|r 137 SGVTILHTIGGDDT--NTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSA 210 (426) Q Consensus 137 ~~Id~Li~IGGdgS--~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i~~l~~~A~s 210 (426) .++|++++-||.|. ..+...-.+|++++ +|| .--.|+||+.|+=..+.-+-.+ .+|.| T Consensus 57 ~~~dGIlvPGGFG~rG~eGki~ai~yARen--~iP-------------fLGIClGmQ~avIEfARnvlgl-~~A~s 116 (250) T d1vcoa1 57 RDVSGILVPGGFGVRGIEGKVRAAQYARER--KIP-------------YLGICLGLQIAVIEFARNVAGL-KGANS 116 (250) T ss_dssp TTCSCEEECCCCSSTTHHHHHHHHHHHHHT--TCC-------------EEEETHHHHHHHHHHHHHTSCC-TTCEE T ss_pred HCCCEEEECCCCCCCCHHHHHHHHHHHHHC--CHH-------------HHHHHHHHHHHHHHHHHHHHHH-HCCCC T ss_conf 248828956887766357899999999873--616-------------9999887889999999999876-40566 No 21 >d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Probab=58.94 E-value=4.5 Score=16.98 Aligned_cols=59 Identities=24% Similarity=0.293 Sum_probs=38.6 Q ss_pred CCCCEEEEECCHHHH--HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 399889994882578--999999999985189962885222234772221146335659999999999999877516 Q gi|254780227|r 137 SGVTILHTIGGDDTN--TTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSAT 211 (426) Q Consensus 137 ~~Id~Li~IGGdgS~--~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i~~l~~~A~s~ 211 (426) .+.|++++-||.|.- .+.....+|++++ +||..| .|+||+.|+=..+.-+-.+ .+|.|. T Consensus 56 ~~~dGIlvPGGFG~RG~eGki~ai~yARen--~iPfLG-------------IClGmQ~avIE~ARnvlg~-~~A~S~ 116 (258) T d1s1ma1 56 KGLDAILVPGGFGYRGVEGMITTARFAREN--NIPYLG-------------ICLGMQVALIDYARHVANM-ENANST 116 (258) T ss_dssp TTCSEEEECCCCSSTTHHHHHHHHHHHHHT--TCCEEE-------------ETHHHHHHHHHHHHHHHCC-TTCEET T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHC--CCCHHH-------------HHHHHHHHHHHHHHHHCCC-CCCCCC T ss_conf 234628851356767788999999999974--861788-------------8888999999999985799-888677 No 22 >d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]} Probab=54.95 E-value=5.2 Score=16.56 Aligned_cols=63 Identities=22% Similarity=0.116 Sum_probs=37.7 Q ss_pred CHHHHHHHHHHHHH---CCCCEEEEECCHHHHHH-HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC Q ss_conf 74569999999986---39988999488257899-9999999985189962885222234772221146 Q gi|254780227|r 123 DENPLEVSAHHLMQ---SGVTILHTIGGDDTNTT-ACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQS 187 (426) Q Consensus 123 ~~~~~~~~~~~l~~---~~Id~Li~IGGdgS~~~-a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~t 187 (426) +.+++..+++.+++ ..-+++|+.=|-|||.- |..|+..+. +.+.|||-.=.-.--+.+.+|-. T Consensus 75 ~~~~~~~l~~~i~~~~~~~d~G~VvtHGTDTl~eTA~~L~~~l~--~~~kPVVlTGa~~P~~~~~sDg~ 141 (363) T d1zq1a2 75 KPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLR--NLGKPVVLVGAQRSSDRPSSDAA 141 (363) T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEE--SCCSCEEEECCSSCTTSTTCSHH T ss_pred CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHC--CCCCCEEEECCCCCCCCCCCCHH T ss_conf 99999999999998632777737983587739999999999724--89963899633413567775107 No 23 >d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]} Probab=52.83 E-value=5.6 Score=16.35 Aligned_cols=92 Identities=13% Similarity=0.057 Sum_probs=62.3 Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 37999836877514899999999999985699789998383660107991304626988887464078740033678886 Q gi|254780227|r 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLT 109 (426) Q Consensus 30 krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~~~ 109 (426) |.||++...-+.|=...++.++-+.+... |+++.-+.- .+ T Consensus 1 ktIg~i~~~~~~pf~~~~~~gi~~~~~~~--gy~~~~~~~------~~-------------------------------- 40 (282) T d1dbqa_ 1 KSIGLLATSSEAAYFAEIIEAVEKNCFQK--GYTLILGNA------WN-------------------------------- 40 (282) T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHH--TCEEEEEEC------TT-------------------------------- T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHC--CCEEEEEEC------CC-------------------------------- T ss_conf 98999957797789999999999999986--999999968------99-------------------------------- Q ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC Q ss_conf 5301110123456745699999999863998899948825789999999999851899628852222347 Q gi|254780227|r 110 NFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDN 179 (426) Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDN 179 (426) +.+....+++.|.+.++|++|+...+.+-.......+ ..++|+|.+....++ T Consensus 41 -------------d~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~-----~~~iPvV~~~~~~~~ 92 (282) T d1dbqa_ 41 -------------NLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEE-----YRHIPMVVMDWGEAK 92 (282) T ss_dssp -------------CHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHH-----TTTSCEEEEECSSCC T ss_pred -------------CHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH-----HCCCCCEEEEECCCC T ss_conf -------------9899999999999669987863112243135666776-----437972699831366 No 24 >d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]} Probab=52.42 E-value=5.7 Score=16.31 Aligned_cols=96 Identities=10% Similarity=0.122 Sum_probs=57.3 Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 37999836877514899999999999985699789998383660107991304626988887464078740033678886 Q gi|254780227|r 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLT 109 (426) Q Consensus 30 krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~~~ 109 (426) +||.|+-|||= =|+..+.+. +.....++|-+ .|..|........ .. T Consensus 3 MkVLvIGsGgR---EhAia~~L~----~s~~~~~l~~~-pgn~g~~~~~~~~------------------------~~-- 48 (105) T d1gsoa2 3 MKVLVIGNGGR---EHALAWKAA----QSPLVETVFVA-PGNAGTALEPALQ------------------------NV-- 48 (105) T ss_dssp EEEEEEECSHH---HHHHHHHHT----TCTTEEEEEEE-ECCHHHHHSTTEE------------------------EC-- T ss_pred CEEEEECCCHH---HHHHHHHHH----CCCCCCEEEEE-CCCCCCCHHHHHC------------------------CC-- T ss_conf 78999888879---999999983----38876479995-1877631022330------------------------55-- Q ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECC Q ss_conf 530111012345674569999999986399889994882578999999999985189962885222 Q gi|254780227|r 110 NFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPK 175 (426) Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPK 175 (426) ..+..+++.+++..++++|| |++||=..-+.. =|++++.++ +|+|+|=.| T Consensus 49 -----------~~~~~d~~~i~~~a~~~~id-lvviGPE~pL~~--Gl~D~l~~~--gI~vfGP~k 98 (105) T d1gsoa2 49 -----------AIGVTDIPALLDFAQNEKID-LTIVGPEAPLVK--GVVDTFRAA--GLKIFGPTA 98 (105) T ss_dssp -----------CCCTTCHHHHHHHHHHTTCS-EEEECSHHHHHT--THHHHHHHT--TCCEESCCT T ss_pred -----------CCCCCCHHHHHHHHHHHCCC-EEEECCHHHHHH--HHHHHHHHC--CCEEECCCH T ss_conf -----------54357689999899982968-899770888876--999999988--797999287 No 25 >d4pgaa_ c.88.1.1 (A:) Glutaminase-asparaginase {Pseudomonas sp., 7A [TaxId: 306]} Probab=51.65 E-value=5.9 Score=16.23 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=45.6 Q ss_pred HHHHHHHHHHH----HHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 45699999999----86399889994882578999999999985189962885222234772221146335659999 Q gi|254780227|r 124 ENPLEVSAHHL----MQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQV 196 (426) Q Consensus 124 ~~~~~~~~~~l----~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~ 196 (426) .+++.++.+.+ +..+.|++|+.-|-|||.-.+.+...+ .+.+.|||-.-.-+--|.+.+|-..-+-.|+.. T Consensus 65 ~~~w~~l~~~i~~~~~~~~~dG~Vi~HGTDTm~~tA~~L~~~--~~~~kpvVlTGs~~p~~~~~sD~~~Nl~~A~~~ 139 (330) T d4pgaa_ 65 NDDLLKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNLV--QKTDKPIVVVGSMRPGTAMSADGMLNLYNAVAV 139 (330) T ss_dssp HHHHHHHHHHHHHHHHCTTCSEEEEECCSTTHHHHHHHHHHH--CCCCSCEEEECCSSCTTSTTCSHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHH--CCCCCCEEEECCCHHCCCCCCCCCCCHHHHHHH T ss_conf 999999999999874067877089967867199999999874--178997798400000015676220037899999 No 26 >d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=49.93 E-value=5.3 Score=16.52 Aligned_cols=31 Identities=6% Similarity=-0.011 Sum_probs=16.3 Q ss_pred CEEEEECCHHHHHHH-HHHHHHHHHCCCCCEEE Q ss_conf 889994882578999-99999998518996288 Q gi|254780227|r 140 TILHTIGGDDTNTTA-CDLLRYLKEKNYNITVV 171 (426) Q Consensus 140 d~Li~IGGdgS~~~a-~~L~e~~~~~~~~i~vi 171 (426) ...++|=|||++... ..|.. +..++.++.+| T Consensus 76 ~~Vv~i~GDGsf~m~~~eL~t-a~~~~l~i~~i 107 (196) T d1pvda3 76 KRVILFIGDGSLQLTVQEIST-MIRWGLKPYLF 107 (196) T ss_dssp CCEEEEEEHHHHHHHGGGHHH-HHHTTCCCEEE T ss_pred CCEEECCCCCCCCCCCCCCCC-CCCCCCCCEEE T ss_conf 703403676444344334320-00025231399 No 27 >d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]} Probab=49.11 E-value=6.5 Score=15.97 Aligned_cols=144 Identities=11% Similarity=0.089 Sum_probs=83.0 Q ss_pred HHHHHHHHHHHCCCCEE--EEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCC---CCCCC-C-CCCCCCCHHHHHHHHH Q ss_conf 69999999986399889--9948825789999999999851899628852222---34772-2-2114633565999999 Q gi|254780227|r 126 PLEVSAHHLMQSGVTIL--HTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKT---IDNDI-I-PIHQSLGALTAAQVSA 198 (426) Q Consensus 126 ~~~~~~~~l~~~~Id~L--i~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKT---IDNDi-~-~td~tiGfdTA~~~~a 198 (426) .++.+.+.+++.+-.+| ++.+||.+..+...+.+.+.+.+.++-=+|+|=+ -|..+ + -.+.++--.+-...+- T Consensus 3 ri~~~f~~lk~~~~~ali~y~t~G~P~~~~~~~~~~~l~~~GaDiiElGiPfSDP~aDGpvIq~a~~~al~~G~~~~~~~ 82 (267) T d1qopa_ 3 RYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCF 82 (267) T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH T ss_conf 69999999997599448998818479879999999999876999999789877654555387765410114540244456 Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCC-----CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH Q ss_conf 99999998775166616999976987-----4289999874014332310111111100014576523287865598999 Q gi|254780227|r 199 CFFDNISNERSATPRSLIIHEVMGRN-----CGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFNLEVE 273 (426) Q Consensus 199 ~~i~~l~~~A~s~~~~~~iVEvMGR~-----aG~LAl~~ala~ga~~~~i~~~~~~~~~~~~~~~d~iliPE~~~~~~~~ 273 (426) +.+..++..- ..-.+.+ ||=. -|.-. +......-+.+-+++|+.|++.... T Consensus 83 ~~~~~~r~~~--~~~pivl---m~Y~N~i~~~G~~~-------------------f~~~~~~~Gv~GliipDlP~ee~~~ 138 (267) T d1qopa_ 83 EMLAIIREKH--PTIPIGL---LMYANLVFNNGIDA-------------------FYARCEQVGVDSVLVADVPVEESAP 138 (267) T ss_dssp HHHHHHHHHC--SSSCEEE---EECHHHHHTTCHHH-------------------HHHHHHHHTCCEEEETTCCGGGCHH T ss_pred HHHHHHCCCC--CCCCEEE---EEECCCHHHCCCHH-------------------HHHHHHHCCCCCEECCCHHHHHHHH T ss_conf 5654401234--6540688---85215220068157-------------------8999986597721245403454678 Q ss_pred HHHHHHHHHCCCC-EEEEEECCCC Q ss_conf 9999998502895-3899504211 Q gi|254780227|r 274 IERLSKVMEKKGS-VAIFVSEGAC 296 (426) Q Consensus 274 ~~~i~~~~~~~~~-~vIVvsEG~~ 296 (426) +.+..++++- .+-.++.... T Consensus 139 ---~~~~~~~~~l~~I~lvaPtt~ 159 (267) T d1qopa_ 139 ---FRQAALRHNIAPIFICPPNAD 159 (267) T ss_dssp ---HHHHHHHTTCEEECEECTTCC T ss_pred ---HHHHHHCCCCEEEEEECCCCC T ss_conf ---877651257608997155662 No 28 >d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} Probab=48.69 E-value=6.5 Score=15.93 Aligned_cols=52 Identities=12% Similarity=0.160 Sum_probs=38.5 Q ss_pred CHHHHHHHHHHHHHCCC-----CEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC Q ss_conf 74569999999986399-----88999488257899999999998518996288522223 Q gi|254780227|r 123 DENPLEVSAHHLMQSGV-----TILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTI 177 (426) Q Consensus 123 ~~~~~~~~~~~l~~~~I-----d~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTI 177 (426) +-+.++++.+.+.++++ |.+|.+||.-....|.-.|..+ .-+++.|-||-|. T Consensus 82 s~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y---~rgi~~i~vPTtl 138 (389) T d1sg6a_ 82 SRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTY---MRGVRYVQVPTTL 138 (389) T ss_dssp SHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHG---GGCCEEEEEECSH T ss_pred CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHH---HCCCCEEEECCCH T ss_conf 99999999999996288767775699965634778899999998---5587636731402 No 29 >d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes [TaxId: 844]} Probab=48.11 E-value=6.7 Score=15.88 Aligned_cols=70 Identities=13% Similarity=0.041 Sum_probs=44.5 Q ss_pred CHHHHHHHHHHHH----HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH Q ss_conf 7456999999998----63998899948825789999999999851899628852222347722211463356599 Q gi|254780227|r 123 DENPLEVSAHHLM----QSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAA 194 (426) Q Consensus 123 ~~~~~~~~~~~l~----~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~ 194 (426) +++++.++++.++ +.+.|++|+.-|-|||.-.+.+..+.-.. +.|||-.=.-.--|.+++|-..-+-.|+ T Consensus 62 ~~~~w~~l~~~i~~~~~~~~~dGiVv~HGTDTm~~ta~~Ls~~~~~--~kPVV~TGa~~p~~~~~sD~~~Nl~~Av 135 (328) T d1wsaa_ 62 TGKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNLTVKS--QKPVVLVGAMRPGSSMSADGPMNLYNAV 135 (328) T ss_dssp CHHHHHHHHHHHHHHHHSTTCCCEEEECCSSSHHHHHHHHHHHCCC--SSCEEEECCSSCTTSTTCSHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCC--CCCEEEECCCCCCCCCCCCCHHHHHHHH T ss_conf 9999999999999874267876699968967499999999986157--9987984366567776742057788999 No 30 >d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Probab=45.99 E-value=6.7 Score=15.85 Aligned_cols=55 Identities=20% Similarity=0.175 Sum_probs=34.9 Q ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH Q ss_conf 99999999863998899948825789999999999851899628852222347722211463356599 Q gi|254780227|r 127 LEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAA 194 (426) Q Consensus 127 ~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~ 194 (426) .+...+.+...+.++++.-||.|+........+.. +-+..++|..=.|+|++.-+ T Consensus 36 ~~~~~~~l~~~~~~~iils~Gpg~~~~~~~~~~i~-------------~~l~~~iPiLGIClG~Q~la 90 (192) T d1i7qb_ 36 AEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELL-------------QRLRGQLPIIGICLGHQAIV 90 (192) T ss_dssp HHHHHHHHHHCSSEEEEECCCSSCGGGSTTHHHHH-------------HHHBTTBCEEEETHHHHHHH T ss_pred CCCCHHHHHHCCCCEEEECCCCCCCCCCCCCHHHH-------------HHHHCCCCEEEEEHHHHHHH T ss_conf 33119999830998687257552222222314567-------------76634764875218889999 No 31 >d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]} Probab=45.47 E-value=7.3 Score=15.62 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=38.6 Q ss_pred HHHHHHHHHHHH----HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC Q ss_conf 456999999998----63998899948825789999999999851899628852222347722211 Q gi|254780227|r 124 ENPLEVSAHHLM----QSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIH 185 (426) Q Consensus 124 ~~~~~~~~~~l~----~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td 185 (426) .+++..+++.++ +.+.|++|+.-|-|||.-.+.+..+.- +.+.|||-.=.-+--|-+.+| T Consensus 64 ~~~w~~la~~i~~~~~~~~~dG~VVtHGTDTm~~TA~~Ls~~l--~~~kPVVlTGsqrp~~~~~sD 127 (331) T d1agxa_ 64 DKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVV--HTDKPIVLVGSMRPSTALSAD 127 (331) T ss_dssp HHHHHHHHHHHHHHHTSTTCCEEEEECCGGGHHHHHHHHHHHC--CCSSCEEEECCSSCTTSTTCS T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH--CCCCCEEEEEECCCCCCCCCC T ss_conf 9999999999999854667764999668675999999999986--458728997102316777840 No 32 >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} Probab=44.70 E-value=7.5 Score=15.54 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=43.2 Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECC-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 7456999999998639988999488-257899999999998518996288522223477222114633565999999999 Q gi|254780227|r 123 DENPLEVSAHHLMQSGVTILHTIGG-DDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFF 201 (426) Q Consensus 123 ~~~~~~~~~~~l~~~~Id~Li~IGG-dgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i 201 (426) ..+.+...+++.++.+.+.+|.+-| .+.+.++..= ...+||||||-.- .+--|+|+ T Consensus 41 tp~rl~~~~~~~~~~~~~viIa~AG~aa~Lpgvva~-------~t~~PVIgVP~~~-------~~~~G~d~--------- 97 (155) T d1xmpa_ 41 TPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAA-------KTNLPVIGVPVQS-------KALNGLDS--------- 97 (155) T ss_dssp SHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHT-------TCCSCEEEEEECC-------TTTTTHHH--------- T ss_pred CHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH-------HCCCEEEEEEEEC-------CCCCCCCC--------- T ss_conf 968898899999860514887541467776257887-------3660078887401-------34767233--------- Q ss_pred HHHHHHHHHCCCCEEEEEECCC------CCCHHH Q ss_conf 9999877516661699997698------742899 Q gi|254780227|r 202 DNISNERSATPRSLIIHEVMGR------NCGWLT 229 (426) Q Consensus 202 ~~l~~~A~s~~~~~~iVEvMGR------~aG~LA 229 (426) +.+.. .++..+-+ =+|+= +|+++| T Consensus 98 --llS~v-qMP~Gipv-~tv~v~~~~~~nAa~~A 127 (155) T d1xmpa_ 98 --LLSIV-QMPGGVPV-ATVAIGKAGSTNAGLLA 127 (155) T ss_dssp --HHHHH-CCCTTCCC-EECCSSHHHHHHHHHHH T ss_pred --HHHHH-HCCCCCCC-EEEEECCCCHHHHHHHH T ss_conf --89998-47468996-58983586417799999 No 33 >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} Probab=44.65 E-value=7.5 Score=15.54 Aligned_cols=48 Identities=17% Similarity=0.262 Sum_probs=31.0 Q ss_pred HHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC Q ss_conf 45699999999863998899948-82578999999999985189962885222234 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTIG-GDDTNTTACDLLRYLKEKNYNITVVGLPKTID 178 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~IG-GdgS~~~a~~L~e~~~~~~~~i~vigiPKTID 178 (426) .+.+...+++.++.+++.+|++- +.+.+.+...- ....||||+|-..+ T Consensus 43 p~~l~~~~~~~e~~~~~viIa~AG~aaaLpgvva~-------~t~~PVIgvP~~~~ 91 (159) T d1u11a_ 43 PDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAA-------WTRLPVLGVPVESR 91 (159) T ss_dssp HHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHH-------HCSSCEEEEEECCT T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEE-------ECCEEEEEECCCCC T ss_conf 68899999999865974899871588877663322-------13505788524656 No 34 >d2ciwa1 a.39.3.1 (A:0-119) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]} Probab=42.67 E-value=3.7 Score=17.50 Aligned_cols=10 Identities=20% Similarity=0.421 Sum_probs=7.7 Q ss_pred CCCCCHHHHH Q ss_conf 6877514899 Q gi|254780227|r 37 AGGIAPCLSS 46 (426) Q Consensus 37 sGG~aPG~N~ 46 (426) +=|||||||+ T Consensus 26 ~RgPCPgLNa 35 (120) T d2ciwa1 26 SRAPCPALNA 35 (120) T ss_dssp CCCSCHHHHH T ss_pred CCCCCHHHHH T ss_conf 6688742677 No 35 >d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi [TaxId: 556]} Probab=41.73 E-value=8.4 Score=15.25 Aligned_cols=70 Identities=14% Similarity=0.103 Sum_probs=43.0 Q ss_pred CHHHHHHHHHHHH----HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH Q ss_conf 7456999999998----63998899948825789999999999851899628852222347722211463356599 Q gi|254780227|r 123 DENPLEVSAHHLM----QSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAA 194 (426) Q Consensus 123 ~~~~~~~~~~~l~----~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~ 194 (426) +.+++.++++.++ ..+.|++|+.-|-|||.-.+.+..+.-.. +.|||-.=.-.--+...+|-...+-.|+ T Consensus 64 ~~~~~~~la~~i~~~~~~~~~dgiVv~HGTDTm~~ta~~Ls~~l~~--~kPVV~TGs~~p~~~~~sDa~~Nl~~A~ 137 (325) T d1o7ja_ 64 TGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHLTVKS--DKPVVFVAAMRPATAISADGPMNLLEAV 137 (325) T ss_dssp CHHHHHHHHHHHHHHHTSTTCCEEEEECCSTTHHHHHHHHHHHCCC--CSCEEEECCSSCTTSTTCSHHHHHHHHH T ss_pred CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC--CCCEEEECCCCCCCCCCCCCHHHHHHHH T ss_conf 9999999999999985346766179954857599999999998457--9986995345243456875487999999 No 36 >d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]} Probab=39.13 E-value=9.2 Score=14.99 Aligned_cols=121 Identities=9% Similarity=0.005 Sum_probs=72.3 Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCC Q ss_conf 63379998368775148999999999999856997899983836601079913046269888874640787400336788 Q gi|254780227|r 28 VAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVK 107 (426) Q Consensus 28 ~~krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~ 107 (426) |-|-|||+...-+.|-.|..+.++.+.+... |+.++-+.-+ . T Consensus 1 s~k~Igvi~p~~~~~~~~~~~~~i~~~~~~~--Gy~~~~~~s~------~------------------------------ 42 (255) T d1byka_ 1 SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQ--GYDPIMMESQ------F------------------------------ 42 (255) T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHH--TCEEEEEECT------T------------------------------ T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECC------C------------------------------ T ss_conf 9988999969988989999999999999985--9999999489------9------------------------------ Q ss_pred CCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC Q ss_conf 86530111012345674569999999986399889994882578999999999985189962885222234772221146 Q gi|254780227|r 108 LTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQS 187 (426) Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~t 187 (426) +.+.....++.+.++++|++|+.+=+.... +.+... +++++.+ +.|.++.+ + T Consensus 43 ---------------d~~~~~~~i~~l~~~~vdgiIi~~~~~~~~------~~~~~~--~~p~v~i----~~~~~~~~-~ 94 (255) T d1byka_ 43 ---------------SPQLVAEHLGVLKRRNIDGVVLFGFTGITE------EMLAHW--QSSLVLL----ARDAKGFA-S 94 (255) T ss_dssp ---------------CHHHHHHHHHHHHTTTCCEEEEECCTTCCT------TTSGGG--SSSEEEE----SSCCSSCE-E T ss_pred ---------------CHHHHHHHHHHHHHCCCCCEEECCCCCHHH------HHHHHC--CCCEEEE----CCCCCCCC-E T ss_conf ---------------989999999999832655201002442399------999976--9999981----66789998-8 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE Q ss_conf 3356599999999999998775166616999 Q gi|254780227|r 188 LGALTAAQVSACFFDNISNERSATPRSLIIH 218 (426) Q Consensus 188 iGfdTA~~~~a~~i~~l~~~A~s~~~~~~iV 218 (426) +++|- -+...++++.+. + .. ++++.++ T Consensus 95 v~~D~-~~~g~~~~~~L~-~-~g-~~~i~~i 121 (255) T d1byka_ 95 VCYDD-EGAIKILMQRLY-D-QG-HRNISYL 121 (255) T ss_dssp EEECH-HHHHHHHHHHHH-H-TT-CCCEEEE T ss_pred EEECC-HHHHHHHHHHHH-H-HC-CCCCCCC T ss_conf 99674-799999999999-8-51-2543235 No 37 >d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Probab=37.82 E-value=4.6 Score=16.94 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=15.6 Q ss_pred CEEEEECCHHHHHHHHHHHHHHHHCCCCCEEE Q ss_conf 88999488257899999999998518996288 Q gi|254780227|r 140 TILHTIGGDDTNTTACDLLRYLKEKNYNITVV 171 (426) Q Consensus 140 d~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vi 171 (426) .-.++|.|||++.....=...+.+.+.++.+| T Consensus 79 ~~vv~i~GDG~f~~~~~el~ta~~~~lpv~~i 110 (183) T d1q6za3 79 RQVIAVIGDGSANYSISALWTAAQYNIPTIFV 110 (183) T ss_dssp SCEEEEEEHHHHTTTGGGHHHHHHHTCCCEEE T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHCCCEEEE T ss_conf 52688315644334517788999959797999 No 38 >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} Probab=36.47 E-value=10 Score=14.73 Aligned_cols=80 Identities=13% Similarity=0.144 Sum_probs=43.4 Q ss_pred HHHHHHHHHHHHHCCCCEEEEE-CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 4569999999986399889994-882578999999999985189962885222234772221146335659999999999 Q gi|254780227|r 124 ENPLEVSAHHLMQSGVTILHTI-GGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFD 202 (426) Q Consensus 124 ~~~~~~~~~~l~~~~Id~Li~I-GGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i~ 202 (426) .+.+...++.+++.+++.+|+. ||.+.+.++ ++- ...+||||+|-.- .+--|.| T Consensus 41 p~rl~~~~~~~~~~~~~viIa~AG~aa~Lpgv--vA~-----~t~~PVIgvP~~~-------~~~~G~d----------- 95 (169) T d1o4va_ 41 PDRMFEYAKNAEERGIEVIIAGAGGAAHLPGM--VAS-----ITHLPVIGVPVKT-------STLNGLD----------- 95 (169) T ss_dssp HHHHHHHHHHTTTTTCCEEEEEEESSCCHHHH--HHH-----HCSSCEEEEEECC-------TTTTTHH----------- T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH--HHH-----HCCEEEEECCCCC-------CCCCCHH----------- T ss_conf 79999999999864982899960577675678--888-----3561488546644-------3476677----------- Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCHHHH Q ss_conf 9998775166616999976987428999 Q gi|254780227|r 203 NISNERSATPRSLIIHEVMGRNCGWLTA 230 (426) Q Consensus 203 ~l~~~A~s~~~~~~iVEvMGR~aG~LAl 230 (426) .+.+.. .++..+-+ =+++=..|+=|. T Consensus 96 aLlS~l-qmp~gvpV-atV~Id~~~nAA 121 (169) T d1o4va_ 96 SLFSIV-QMPGGVPV-ATVAINNAKNAG 121 (169) T ss_dssp HHHHHH-TCCTTCCC-EECCTTCHHHHH T ss_pred HHHHHC-CCCCCCCC-EEEECCCHHHHH T ss_conf 798860-48766880-234427648999 No 39 >d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]} Probab=36.10 E-value=10 Score=14.69 Aligned_cols=49 Identities=14% Similarity=0.139 Sum_probs=30.6 Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECC-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCC Q ss_conf 7456999999998639988999488-2578999999999985189962885222234 Q gi|254780227|r 123 DENPLEVSAHHLMQSGVTILHTIGG-DDTNTTACDLLRYLKEKNYNITVVGLPKTID 178 (426) Q Consensus 123 ~~~~~~~~~~~l~~~~Id~Li~IGG-dgS~~~a~~L~e~~~~~~~~i~vigiPKTID 178 (426) .++.+...+++.++.+++.+|.+-| ...+.++-.= ...+||||||-..+ T Consensus 41 tp~~l~~~~~~~~~~~~~ViIa~AG~aa~LpgvvA~-------~t~~PVIgVP~~~~ 90 (163) T d1qcza_ 41 TPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAA-------KTLVPVLGVPVQSA 90 (163) T ss_dssp CHHHHHHHHHHTTTTTCSEEEEEECSSCCHHHHHHH-------SCSSCEEEEECCCT T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH-------HCCCEEEECCCCCC T ss_conf 889999999999974976999852688765204667-------34411451133112 No 40 >d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Probab=35.40 E-value=10 Score=14.62 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=27.9 Q ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEE Q ss_conf 9999999986399889994882578999999999985189962885 Q gi|254780227|r 127 LEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVG 172 (426) Q Consensus 127 ~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vig 172 (426) -+.+++.|++++|+..+.+-|+..+.-...| .+ .+|.+|. T Consensus 8 ~d~l~~~L~~~Gv~~vFg~pG~~~~~l~~al----~~--~~i~~i~ 47 (181) T d1ozha2 8 ADLVVSQLEAQGVRQVFGIPGAKIDKVFDSL----LD--SSIRIIP 47 (181) T ss_dssp HHHHHHHHHHHTCCEEEEECCTTTHHHHHHG----GG--SSSEEEE T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHH----HH--HHCCCCC T ss_conf 9999999998799999993857489999999----86--4011244 No 41 >d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]} Probab=35.34 E-value=10 Score=14.61 Aligned_cols=126 Identities=11% Similarity=0.058 Sum_probs=70.6 Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCC Q ss_conf 99983687751489999999999998569978999838366010799130462698888746407874003367888653 Q gi|254780227|r 32 VAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLTNF 111 (426) Q Consensus 32 I~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~~~~~ 111 (426) ||+++.-=.-|+.+.++.++-+.|... |+++.-+.-+. . T Consensus 3 igv~~~~l~~~~~~~i~~~i~~~a~~~--Gy~v~v~~~~~-------------~-------------------------- 41 (271) T d1jyea_ 3 IGVATSSLALHAPSQIVAAILSRADQL--GASVVVSMVER-------------S-------------------------- 41 (271) T ss_dssp EEEEESCTTSHHHHHHHHHHHHHHHHT--TCEEEEEECCS-------------S-------------------------- T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHC--CCEEEEEECCC-------------C-------------------------- T ss_conf 999949988758999999999999985--99899997999-------------9-------------------------- Q ss_pred CHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHH Q ss_conf 01110123456745699999999863998899948825789999999999851899628852222347722211463356 Q gi|254780227|r 112 SDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGAL 191 (426) Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfd 191 (426) ..+.....++.|.+.++|++|+.+-.+.... +.+++. ..++|||.+=...+..++ ++.+| T Consensus 42 -----------~~~~~~~~l~~l~~~~vdgiIl~~~~~~~~~---~~~~~~--~~~iPvV~~d~~~~~~~~----~V~~D 101 (271) T d1jyea_ 42 -----------GVEACKTAVHNLLAQRVSGLIINYPLDDQDA---IAVEAA--CTNVPALFLDVSDQTPIN----SIIFS 101 (271) T ss_dssp -----------SHHHHHHHHHHHHTTTCSCEEEESCCCHHHH---HHHHHH--TTTSCEEESSSCTTSSSC----EEEEC T ss_pred -----------CHHHHHHHHHHHHHCCCCEEEECCCCCCHHH---HHHHHH--HCCCCEEEEECCCCCCCC----CCCCC T ss_conf -----------9999999999999659998995166674269---999998--639984431023445677----33433 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 599999999999998775166616999976987 Q gi|254780227|r 192 TAAQVSACFFDNISNERSATPRSLIIHEVMGRN 224 (426) Q Consensus 192 TA~~~~a~~i~~l~~~A~s~~~~~~iVEvMGR~ 224 (426) -. +.+..+++.+.. ..+ +++.++- |.. T Consensus 102 ~~-~~~~~~~~~L~~--~G~-~~i~~i~--~~~ 128 (271) T d1jyea_ 102 HE-DGTRLGVEHLVA--LGH-QQIALLA--GPL 128 (271) T ss_dssp HH-HHHHHHHHHHHH--HTC-CSEEEEE--CCT T ss_pred HH-HCCCCCEEEEEC--CCC-CCCCCCC--CCC T ss_conf 11-022100012201--124-5433222--344 No 42 >d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Haloferax volcanii [TaxId: 2246]} Probab=34.98 E-value=11 Score=14.58 Aligned_cols=52 Identities=12% Similarity=0.064 Sum_probs=34.9 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC Q ss_conf 56999999998639988999488257899999999998518996288522223477222 Q gi|254780227|r 125 NPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIP 183 (426) Q Consensus 125 ~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~ 183 (426) ..++.+++.+++.+-+-+++|||-.-+..+..+ --.+-+=-||...+.|..+ T Consensus 79 ~s~~~a~~~~~~~~~~~i~IiGG~~iy~~~l~~-------~d~i~lT~I~~~~~gD~~F 130 (157) T d1vdra_ 79 ASVEEAVDIAASLDAETAYVIGGAAIYALFQPH-------LDRMVLSRVPGEYEGDTYY 130 (157) T ss_dssp SSHHHHHHHHHHTTCSCEEEEECHHHHHHHGGG-------CSEEEEEEEEEECCCSEEC T ss_pred EEHHHHHHHHHCCCCCEEEEEECHHHHHHHCCC-------CCEEEEEEECCCCCCCEEC T ss_conf 029999999751798469999363786531131-------7999999857864688888 No 43 >d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Probab=34.49 E-value=11 Score=14.53 Aligned_cols=27 Identities=11% Similarity=0.116 Sum_probs=21.5 Q ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHH Q ss_conf 999999998639988999488257899 Q gi|254780227|r 127 LEVSAHHLMQSGVTILHTIGGDDTNTT 153 (426) Q Consensus 127 ~~~~~~~l~~~~Id~Li~IGGdgS~~~ 153 (426) .+.+++.|+++||+.++.+-|+..+.- T Consensus 4 ~~~i~e~L~~~GV~~vFgipG~~~~~~ 30 (180) T d1q6za2 4 HGTTYELLRRQGIDTVFGNPGSNALPF 30 (180) T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGHHH T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHH T ss_conf 999999999889999999894768999 No 44 >d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]} Probab=31.92 E-value=12 Score=14.26 Aligned_cols=49 Identities=10% Similarity=0.053 Sum_probs=37.5 Q ss_pred CHHHHHHHHHH----HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf 74569999999----9863998899948825789999999999851899628852 Q gi|254780227|r 123 DENPLEVSAHH----LMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGL 173 (426) Q Consensus 123 ~~~~~~~~~~~----l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigi 173 (426) ++++.++.+++ +++.+=|-.|+|+=|...-+-..-.|.+++. +||+|.| T Consensus 44 ~pe~~e~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~--giP~ivI 96 (282) T d1u6ka1 44 DPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADS--EYPAVII 96 (282) T ss_dssp SHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTS--SSCEEEE T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHC--CCCEEEE T ss_conf 9788888998888788851999899978988899957799999756--9987997 No 45 >d1yzya1 c.146.1.1 (A:1-412) Hypothetical protein HI1011 {Haemophilus influenzae [TaxId: 727]} Probab=30.71 E-value=12 Score=14.13 Aligned_cols=27 Identities=19% Similarity=-0.017 Sum_probs=14.6 Q ss_pred HHHHHHHHHHHCCCCEEEEEC---CHHHHH Q ss_conf 699999999863998899948---825789 Q gi|254780227|r 126 PLEVSAHHLMQSGVTILHTIG---GDDTNT 152 (426) Q Consensus 126 ~~~~~~~~l~~~~Id~Li~IG---GdgS~~ 152 (426) ....+.+.|++.+...++.-= .|-|++ T Consensus 60 ~v~~~~~~l~~~~~~~~~~Kv~s~~DStlR 89 (412) T d1yzya1 60 QSLRAYQWLKENGCTQFYFKYCSTFDSTAK 89 (412) T ss_dssp HHHHHHHHHHHTTCCSEEEECCTTCCCCTT T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCCCCCC T ss_conf 999999999863897158999731337776 No 46 >d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]} Probab=30.45 E-value=13 Score=14.10 Aligned_cols=97 Identities=10% Similarity=0.039 Sum_probs=63.3 Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCC Q ss_conf 63379998368775148999999999999856997899983836601079913046269888874640787400336788 Q gi|254780227|r 28 VAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVK 107 (426) Q Consensus 28 ~~krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR~~ 107 (426) +.+|||++.....-|-...+..|+-+.++.+ |+++.-+ .. .+. T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~--G~~v~~~--------~~-----~~~---------------------- 44 (316) T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKAL--GIDVTYD--------GP-----TEP---------------------- 44 (316) T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHH--TCEEEEC--------CC-----SSC---------------------- T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHC--CCEEEEE--------EC-----CCC---------------------- T ss_conf 7889999938999989999999999999981--9979999--------79-----999---------------------- Q ss_pred CCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC Q ss_conf 8653011101234567456999999998639988999488257899999999998518996288522223477 Q gi|254780227|r 108 LTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDND 180 (426) Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDND 180 (426) +.+.....++++...+.|++|+...+.+.... .+.+ +.. .+++++.+.-.+.++ T Consensus 45 ---------------d~~~q~~~i~~~i~~~~dgIIi~~~~~~~~~~-~~~~-a~~--~gi~vv~~d~~~~~~ 98 (316) T d1tjya_ 45 ---------------SVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCP-ALKR-AMQ--RGVKILTWDSDTKPE 98 (316) T ss_dssp ---------------CHHHHHHHHHHHHHTTCSEEEECCSSSSTTHH-HHHH-HHH--TTCEEEEESSCCCGG T ss_pred ---------------CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHH-HHC--CCCCCEECCCCCCCC T ss_conf ---------------99999999999996599866411443201245-5665-421--465411114533222 No 47 >d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=29.96 E-value=13 Score=14.05 Aligned_cols=61 Identities=15% Similarity=0.097 Sum_probs=38.6 Q ss_pred CHHHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC Q ss_conf 7456999999998---63998899948825789999999999851899628852222347722211 Q gi|254780227|r 123 DENPLEVSAHHLM---QSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIH 185 (426) Q Consensus 123 ~~~~~~~~~~~l~---~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td 185 (426) +.+++.++++.++ +.+.|++|+.-|-|||.-.+.+....-+. +.|||-.=.-+--+-+++| T Consensus 66 ~~~~w~~la~~i~~~~~~~~dG~VVtHGTDTl~~TA~~Ls~~l~~--~kPVVlTGa~rp~~~~~sD 129 (352) T d2d6fa2 66 KPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFMLRT--PVPVVFTGAQRSSDRPSSD 129 (352) T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHHHHHHEEC--SSCEEEECCSSCTTSTTCT T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCC--CCCEEEECCCCCCCCCCCC T ss_conf 999999999999986035677499965832699999999987266--9998996555246676762 No 48 >d1ig3a2 c.100.1.1 (A:10-178) Thiamin pyrophosphokinase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Probab=29.33 E-value=13 Score=13.98 Aligned_cols=127 Identities=13% Similarity=0.047 Sum_probs=71.1 Q ss_pred CHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCC----------CCE--ECCCCC Q ss_conf 21210348763379998368775148999999999999856997899983836601079----------913--046269 Q gi|254780227|r 19 VLSFLEKDMVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLD----------DKI--TITEDM 86 (426) Q Consensus 19 ~~~~~~~~~~~krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~----------~~~--~l~~l~ 86 (426) |..++..+-. .+.+++..-.|-|. ....+.. +-.-.+..-+|..-|++- +.+ +++..+ T Consensus 18 p~~~~~~~~~-~~~aliiLN~pi~~---~~~~lw~------~a~~~I~aDGGAN~L~d~~~~~~~~~~PD~IiGDfDSi~ 87 (169) T d1ig3a2 18 PLEPLLPTGN-LKYCLVVLNQPLDA---RFRHLWK------KALLRACADGGANHLYDLTEGERESFLPEFVSGDFDSIR 87 (169) T ss_dssp TTGGGSSSCC-CCEEEEECSSCCCT---THHHHHH------HCSEEEEETTHHHHHHHTCTTCGGGCCCSEEEECTTSSC T ss_pred CCCCCCCCCC-CCEEEEEECCCCCH---HHHHHHH------HCCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCC T ss_conf 5334689887-47799990898488---8999997------478799974779999987532023799998976688898 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH------CCCCEEEEECC-----HHHHHHHH Q ss_conf 88887464078740033678886530111012345674569999999986------39988999488-----25789999 Q gi|254780227|r 87 RQNAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQ------SGVTILHTIGG-----DDTNTTAC 155 (426) Q Consensus 87 ~~~v~~~~~~GGt~LgtsR~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~Id~Li~IGG-----dgS~~~a~ 155 (426) .+..+.+...|-.++... . ++..+++++++-+.+ .+++.++++|+ |=++.... T Consensus 88 ~~~~~~~~~~g~~ii~~~-d---------------QD~TD~eKAl~~~~~~~~~~~~~~~~I~vlG~~GGR~DH~lanl~ 151 (169) T d1ig3a2 88 PEVKEYYTKKGCDLISTP-D---------------QDHTDFTKCLQVLQRKIEEKELQVDVIVTLGGLGGRFDQIMASVN 151 (169) T ss_dssp HHHHHHHHHTTCEEEECC-C---------------TTSCHHHHHHHHHHHHHHHTTCCCSEEEEECCSSSCHHHHHHHHH T ss_pred HHHHHHHHHCCCEEEECC-C---------------CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH T ss_conf 578899986597587786-6---------------575669999999997414431699879999278882879999999 Q ss_pred HHHHHHHHCCCCCEEEEE Q ss_conf 999999851899628852 Q gi|254780227|r 156 DLLRYLKEKNYNITVVGL 173 (426) Q Consensus 156 ~L~e~~~~~~~~i~vigi 173 (426) .|.++.+ -.+++||-+ T Consensus 152 ~L~~~~~--~~~~~VIll 167 (169) T d1ig3a2 152 TLFQATH--ITPVPIIII 167 (169) T ss_dssp HHHHGGG--TCSSCEEEE T ss_pred HHHHHHC--CCCCCEEEE T ss_conf 9997024--799847983 No 49 >d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Probab=27.98 E-value=14 Score=13.83 Aligned_cols=50 Identities=14% Similarity=0.015 Sum_probs=24.2 Q ss_pred HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH Q ss_conf 999863998899948825789999999999851899628852222347722211463356599 Q gi|254780227|r 132 HHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAA 194 (426) Q Consensus 132 ~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~ 194 (426) +.+.++..++++.-||.+.......... . .+-+.+++|..=.|+|++--+ T Consensus 37 ~~~~~~~~~gvilsgg~~~~~~~~~~~~-i------------~~~~~~~~PiLGIClG~Q~l~ 86 (188) T d1wl8a1 37 EEIKAMNPKGIIFSGGPSLENTGNCEKV-L------------EHYDEFNVPILGICLGHQLIA 86 (188) T ss_dssp HHHHHTCCSEEEECCCSCTTCCTTHHHH-H------------HTGGGTCSCEEEETHHHHHHH T ss_pred HHHHHHCCCEEEECCCCCCCCCCCCCCC-C------------CCCCCCCCCEEEHHHHHHHHH T ss_conf 9986423662442167641034543101-1------------101112201222256665466 No 50 >d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=27.77 E-value=12 Score=14.29 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=25.9 Q ss_pred HHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH Q ss_conf 210348763379998368775148999999999999856997899983836 Q gi|254780227|r 21 SFLEKDMVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGY 71 (426) Q Consensus 21 ~~~~~~~~~krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~~~G~ 71 (426) +.|++.|.-|||.|..|||.= +++.. ..++. .+.++++++.-+ T Consensus 2 ~il~~~~~gkKv~vA~SGGvD----Ssvll--~lL~~--~g~~v~~~~~~~ 44 (188) T d1k92a1 2 TILKHLPVGQRIGIAFSGGLD----TSAAL--LWMRQ--KGAVPYAYTANL 44 (188) T ss_dssp CEECSCCTTSEEEEECCSSHH----HHHHH--HHHHH--TTCEEEEEEEEC T ss_pred CCCCCCCCCCEEEEEECCCHH----HHHHH--HHHHH--CCCCCEEEEEEC T ss_conf 410138999989999579779----99999--99998--599473985105 No 51 >d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=27.53 E-value=14 Score=13.78 Aligned_cols=81 Identities=20% Similarity=0.099 Sum_probs=43.5 Q ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 99999999863998899948825789999999999851899628852222347722211463356599999999999998 Q gi|254780227|r 127 LEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISN 206 (426) Q Consensus 127 ~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i~~l~~ 206 (426) -+.+++.|+++||+.++.+-|+..+.-...|. + ..+|.+|... -| .++-+.|..-. T Consensus 6 ~~~i~~~L~~~Gv~~vFgipG~~~~~l~~al~----~-~~~i~~i~~~---------~E------~~A~~~A~gya---- 61 (180) T d1pvda2 6 GKYLFERLKQVNVNTVFGLPGDFNLSLLDKIY----E-VEGMRWAGNA---------NE------LNAAYAADGYA---- 61 (180) T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHHGGG----G-STTCEECCCS---------CH------HHHHHHHHHHH---- T ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH----H-HCCEEEEEEC---------CC------CHHHHHHHHHH---- T ss_conf 99999999987999999907802799999998----7-2663786542---------56------42467888776---- Q ss_pred HHHHCCCCEEEEEECCCCCCHHHHHHHHHC Q ss_conf 775166616999976987428999987401 Q gi|254780227|r 207 ERSATPRSLIIHEVMGRNCGWLTAYSAHCY 236 (426) Q Consensus 207 ~A~s~~~~~~iVEvMGR~aG~LAl~~ala~ 236 (426) +.+.+.+.++ +-| .|.+-+.++++. T Consensus 62 --r~t~~~~v~~-t~G--pG~~N~~~gl~~ 86 (180) T d1pvda2 62 --RIKGMSCIIT-TFG--VGELSALNGIAG 86 (180) T ss_dssp --HHHSCEEEEE-ETT--HHHHHHHHHHHH T ss_pred --HCCCCCEEEE-CCC--CCCCHHHHHHHH T ss_conf --4048752552-356--664205588999 No 52 >d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Probab=27.04 E-value=14 Score=13.72 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=28.5 Q ss_pred HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEE Q ss_conf 999999986399889994882578999999999985189962885 Q gi|254780227|r 128 EVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVG 172 (426) Q Consensus 128 ~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vig 172 (426) +.+++.|++++|+.++.+-|+..+.-...|. .+..+|++|. T Consensus 7 ~~i~~~L~~~Gv~~vFgipG~~~~~l~dal~----~~~~~i~~i~ 47 (174) T d2ez9a2 7 AAVIKVLEAWGVDHLYGIPGGSINSIMDALS----AERDRIHYIQ 47 (174) T ss_dssp HHHHHHHHHTTCCEEEECCCGGGHHHHHHHH----HTTTTSEEEE T ss_pred HHHHHHHHHCCCCEEEEECCHHHHHHHHHHH----HCCCCCEEEE T ss_conf 9999999987999999988775899999999----6079828999 No 53 >d1b5ta_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Escherichia coli [TaxId: 562]} Probab=26.80 E-value=15 Score=13.69 Aligned_cols=76 Identities=11% Similarity=0.128 Sum_probs=42.1 Q ss_pred HHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHC-CCC-CCC-CCCCCCCCCCHHHHCCCCCCCHHH Q ss_conf 99999998569978999838366010799130462698888746407-874-003-367888653011101234567456 Q gi|254780227|r 50 MLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSY-GGS-PIG-NSRVKLTNFSDCIKRGLIKKDENP 126 (426) Q Consensus 50 ~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~-GGt-~Lg-tsR~~~~~~~~~~~~~~~~~~~~~ 126 (426) ..++.+..+. -.-+-+-+|-.|= ....+...+..+.+. |-. +.+ |+|.. +... T Consensus 23 ~~~~~L~~~~--p~~vsVT~~aggs-------~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~---------------n~~~ 78 (275) T d1b5ta_ 23 NSIDRLSSLK--PKFVSVTYGANSG-------ERDRTHSIIKGIKDRTGLEAAPHLTCIDA---------------TPDE 78 (275) T ss_dssp HHHHHHHTTC--CSEEEECCCSSHH-------HHHHHHHHHHHHHHHHCCCEEEEECSTTC---------------CHHH T ss_pred HHHHHHHCCC--CCEEEECCCCCCC-------CHHHHHHHHHHHHHHCCCCCEEEECCCCC---------------CHHH T ss_conf 9999985579--9979934699996-------63539999999975138871566520156---------------1767 Q ss_pred HHHHHHHHHHCCCCEEEEECCHH Q ss_conf 99999999863998899948825 Q gi|254780227|r 127 LEVSAHHLMQSGVTILHTIGGDD 149 (426) Q Consensus 127 ~~~~~~~l~~~~Id~Li~IGGdg 149 (426) ++..+..+..+||+.+++++||- T Consensus 79 l~~~l~~~~~~GI~niL~l~GD~ 101 (275) T d1b5ta_ 79 LRTIARDYWNNGIRHIVALRGDL 101 (275) T ss_dssp HHHHHHHHHHTTCCEEEECCCCC T ss_pred HHHHHHHHHHHHHCEEEEECCCC T ss_conf 99999889997317277745777 No 54 >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} Probab=26.20 E-value=15 Score=13.63 Aligned_cols=110 Identities=13% Similarity=0.159 Sum_probs=58.4 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 56999999998639988999488257899999999998518996288522223477222114633565999999999999 Q gi|254780227|r 125 NPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNI 204 (426) Q Consensus 125 ~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA~~~~a~~i~~l 204 (426) +..+.+.+.+...+.|.+|.=||+.++ .++ ..++|||-||-| ||| +.+++ T Consensus 38 ~av~~~~~~~~~~~~DviISRG~ta~~---------ir~-~~~iPVV~I~vs------------~~D-----il~al--- 87 (186) T d2pjua1 38 KAVTYIRKKLANERCDAIIAAGSNGAY---------LKS-RLSVPVILIKPS------------GYD-----VLQFL--- 87 (186) T ss_dssp HHHHHHHHHTTTSCCSEEEEEHHHHHH---------HHT-TCSSCEEEECCC------------HHH-----HHHHH--- T ss_pred HHHHHHHHHHHCCCCCEEEECCHHHHH---------HHH-HCCCCEEEECCC------------HHH-----HHHHH--- T ss_conf 899999999870899899979638999---------998-689987997088------------768-----99999--- Q ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 98775166616999976987428999987401433231011111110001457652328786559899999999985028 Q gi|254780227|r 205 SNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEKK 284 (426) Q Consensus 205 ~~~A~s~~~~~~iVEvMGR~aG~LAl~~ala~ga~~~~i~~~~~~~~~~~~~~~d~iliPE~~~~~~~~~~~i~~~~~~~ 284 (426) ..|...++++.+|---.--.|. ...+.+- + .+ +....+.-++..+..-+..+.. T Consensus 88 -~~a~~~~~kiavV~~~~~~~~~-~~~~~ll-~--------------------~~---i~~~~~~~~~e~~~~v~~l~~~ 141 (186) T d2pjua1 88 -AKAGKLTSSIGVVTYQETIPAL-VAFQKTF-N--------------------LR---LDQRSYITEEDARGQINELKAN 141 (186) T ss_dssp -HHTTCTTSCEEEEEESSCCHHH-HHHHHHH-T--------------------CC---EEEEEESSHHHHHHHHHHHHHT T ss_pred -HHHHHHCCCEEEEECCCCCHHH-HHHHHHH-C--------------------CC---EEEEEECCHHHHHHHHHHHHHC T ss_conf -9999758978999177625699-9999995-9--------------------96---4899963889999999999987 Q ss_pred CCEEEE Q ss_conf 953899 Q gi|254780227|r 285 GSVAIF 290 (426) Q Consensus 285 ~~~vIV 290 (426) |+-+|| T Consensus 142 G~~vVV 147 (186) T d2pjua1 142 GTEAVV 147 (186) T ss_dssp TCCEEE T ss_pred CCCEEE T ss_conf 998999 No 55 >d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Probab=26.07 E-value=15 Score=13.61 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=27.8 Q ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEE Q ss_conf 9999999986399889994882578999999999985189962885 Q gi|254780227|r 127 LEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVG 172 (426) Q Consensus 127 ~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vig 172 (426) .+.+++.|++++|+.++.+-|...+.-...|. +. ++.+|. T Consensus 7 ~~~i~~~L~~~GV~~vFg~pG~~~~~~~~al~----~~--~i~~i~ 46 (188) T d2ji7a2 7 FHVLIDALKMNDIDTMYGVVGIPITNLARMWQ----DD--GQRFYS 46 (188) T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHHHHH----HT--TCEEEE T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH----HC--CCEEEE T ss_conf 99999999987999999948887899999997----37--997998 No 56 >d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Probab=24.55 E-value=16 Score=13.43 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=22.8 Q ss_pred CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE Q ss_conf 4876337999836877514899999999999985699789998 Q gi|254780227|r 25 KDMVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYY 67 (426) Q Consensus 25 ~~~~~krI~IltsGG~aPG~N~~I~~iv~~a~~~~~~~~v~G~ 67 (426) +-+|..|||||-- || | ++++++.++.. |.++.-+ T Consensus 2 ~~~~~mkIgii~~----~G-n--~~s~~~al~~~--G~~~~~v 35 (202) T d1q7ra_ 2 YFQSNMKIGVLGL----QG-A--VREHVRAIEAC--GAEAVIV 35 (202) T ss_dssp CCCCCCEEEEESC----GG-G--CHHHHHHHHHT--TCEEEEE T ss_pred CCCCCCEEEEEEC----CC-C--HHHHHHHHHHC--CCCEEEE T ss_conf 7546987999978----99-8--99999999987--9929998 No 57 >d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]} Probab=24.43 E-value=16 Score=13.42 Aligned_cols=24 Identities=4% Similarity=-0.065 Sum_probs=18.6 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCH Q ss_conf 569999999986399889994882 Q gi|254780227|r 125 NPLEVSAHHLMQSGVTILHTIGGD 148 (426) Q Consensus 125 ~~~~~~~~~l~~~~Id~Li~IGGd 148 (426) ..++++.+.+++.+||++++.... T Consensus 26 ~R~~klr~~M~e~~iDallit~~~ 49 (156) T d1kp0a1 26 RRZBRLRAWMAKSBIDAVLFTSYH 49 (156) T ss_dssp HHHHHHHHHHHHHTCSEEEECSHH T ss_pred HHHHHHHHHHHHCCCCEEEECCCC T ss_conf 999999999998799999986844 No 58 >d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]} Probab=24.20 E-value=16 Score=13.39 Aligned_cols=28 Identities=29% Similarity=0.392 Sum_probs=17.9 Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCC Q ss_conf 9999999851899628852222347722 Q gi|254780227|r 155 CDLLRYLKEKNYNITVVGLPKTIDNDII 182 (426) Q Consensus 155 ~~L~e~~~~~~~~i~vigiPKTIDNDi~ 182 (426) ..|.+..++.+...-|||.|+..|+... T Consensus 41 ~~l~~ii~e~~i~~iVvGlP~~~dG~~~ 68 (98) T d1iv0a_ 41 EALLDFVRREGLGKLVVGLPLRTDLKES 68 (98) T ss_dssp HHHHHHHHHHTCCEEEEECCCCCCSSSC T ss_pred HHHHHHHHHHCCCEEECCCCCCCCCCCC T ss_conf 9999999863301057166322379837 No 59 >d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]} Probab=23.86 E-value=16 Score=13.35 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=42.6 Q ss_pred HHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH Q ss_conf 4569999999986--399889994882578999999999985189962885222234772221146335659 Q gi|254780227|r 124 ENPLEVSAHHLMQ--SGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTA 193 (426) Q Consensus 124 ~~~~~~~~~~l~~--~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdTA 193 (426) ++++..+.+.+++ .+.|++|++-|-|||.-.+......- +.+.|||-.=.-.--|.+.+|-..=+-.| T Consensus 63 ~~~~~~l~~~i~~~~~~~dG~Vv~HGTDTm~~tA~~L~~~~--~~~kpVV~TGa~~p~~~~~sD~~~Nl~~A 132 (326) T d1nnsa_ 63 DNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTV--KCDKPVVMVGAMRPSTSMSADGPFNLYNA 132 (326) T ss_dssp HHHHHHHHHHHHHHGGGCSEEEEECCSSSHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH T ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH--CCCCCEEEECCCCCCCCCCCCHHHHHHHH T ss_conf 99999999999986434784799558685999999999975--42886799502340578773137889999 No 60 >d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]} Probab=23.77 E-value=17 Score=13.34 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=28.2 Q ss_pred HHHHHHHHHCCCCEEEEE-------CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC Q ss_conf 999999986399889994-------882578999999999985189962885222234772 Q gi|254780227|r 128 EVSAHHLMQSGVTILHTI-------GGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 (426) Q Consensus 128 ~~~~~~l~~~~Id~Li~I-------GGdgS~~~a~~L~e~~~~~~~~i~vigiPKTIDNDi 181 (426) +..++..-..|-|.-+.| .|-+++.+|..|+++.++.++++-+.| =.|+|.|- T Consensus 69 ~~~lr~alAmGaD~avli~~~~~~~~~~d~~ata~~la~~~~~~~~DLIl~G-~~s~D~~t 128 (246) T d1efpb_ 69 AETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAG-KQAIDNDM 128 (246) T ss_dssp HHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEE-SCCTTTCC T ss_pred HHHHHHHHHHCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE-EEECCCCC T ss_conf 8999988860577004886035534465899999999998750089899997-33023466 No 61 >d1v93a_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Thermus thermophilus [TaxId: 274]} Probab=23.70 E-value=17 Score=13.33 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=45.9 Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCEECCCCCHHHHHHHHHCCCCCC-C-CCCCCCCCCCHHHHCCCC Q ss_conf 48999999999999856997899983836601079913046269888874640787400-3-367888653011101234 Q gi|254780227|r 43 CLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPI-G-NSRVKLTNFSDCIKRGLI 120 (426) Q Consensus 43 G~N~~I~~iv~~a~~~~~~~~v~G~~~G~~GL~~~~~~~l~~l~~~~v~~~~~~GGt~L-g-tsR~~~~~~~~~~~~~~~ 120 (426) ++.+ ++..++.+..+.+ .-+-+-+|-.|-... .+......+.+.|-..+ + |+|.. T Consensus 27 ~~~~-l~~~~~~L~~~~p--~fisVT~~~~g~~~~-------~tl~~a~~l~~~G~~~i~Hlt~r~~------------- 83 (292) T d1v93a_ 27 GEEA-LFRTLEELKAFRP--AFVSITYGAMGSTRE-------RSVAWAQRIQSLGLNPLAHLTVAGQ------------- 83 (292) T ss_dssp HHHH-HHHHHHHHHTTCC--SEEEECCCGGGTTHH-------HHHHHHHHHHHTTCCEEEEECCTTS------------- T ss_pred HHHH-HHHHHHHHHCCCC--CEEEECCCCCCCCCH-------HHHHHHHHHHHCCCCCEEEEEECCC------------- T ss_conf 8999-9999999734799--989945899984505-------0999999998679871333463176------------- Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCHH Q ss_conf 56745699999999863998899948825 Q gi|254780227|r 121 KKDENPLEVSAHHLMQSGVTILHTIGGDD 149 (426) Q Consensus 121 ~~~~~~~~~~~~~l~~~~Id~Li~IGGdg 149 (426) +...++..+..+..+||+.+++++||. T Consensus 84 --n~~~l~~~l~~~~~~GI~niLal~GD~ 110 (292) T d1v93a_ 84 --SRKEVAEVLHRFVESGVENLLALRGDP 110 (292) T ss_dssp --CHHHHHHHHHHHHHTTCCEEEECCCCC T ss_pred --HHHHHHHHHHHHHHHCCCEEEECCCCC T ss_conf --088899999999980968674326898 No 62 >d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Probab=22.92 E-value=17 Score=13.23 Aligned_cols=26 Identities=12% Similarity=0.018 Sum_probs=14.8 Q ss_pred HHHHHHHHHCCCCEEEEECCHHHHHH Q ss_conf 99999998639988999488257899 Q gi|254780227|r 128 EVSAHHLMQSGVTILHTIGGDDTNTT 153 (426) Q Consensus 128 ~~~~~~l~~~~Id~Li~IGGdgS~~~ 153 (426) +.+++.|+++||+.++.+-|+..+.- T Consensus 8 ~~i~~~L~~~GV~~vFgipG~~~~~l 33 (184) T d2djia2 8 LAVMKILESWGADTIYGIPSGTLSSL 33 (184) T ss_dssp HHHHHHHHHTTCCEEEECCCTTTHHH T ss_pred HHHHHHHHHCCCCEEEEECCHHHHHH T ss_conf 99999999879989999787607999 No 63 >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Probab=22.36 E-value=18 Score=13.16 Aligned_cols=115 Identities=11% Similarity=-0.008 Sum_probs=55.5 Q ss_pred EEEEEEECCCCCHHHH-HHHHHHHHHHHHHCCCCEEEEEC--CHHH-CCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCC Q ss_conf 3799983687751489-99999999999856997899983--8366-010799130462698888746407874003367 Q gi|254780227|r 30 HKVAFLTAGGIAPCLS-SIIGMLINHYNKILPKAELIYYR--FGYQ-GLLLDDKITITEDMRQNAEQLLSYGGSPIGNSR 105 (426) Q Consensus 30 krI~IltsGG~aPG~N-~~I~~iv~~a~~~~~~~~v~G~~--~G~~-GL~~~~~~~l~~l~~~~v~~~~~~GGt~LgtsR 105 (426) |||.|.|+ |. |+| ..-.++.+.+.. +|++|..+- +|.+ -+++....++..+ ..+. T Consensus 1 kkili~~~-Gt--GGHv~~a~al~~~L~~--~G~eV~~i~~~~~~~~~~~~~~~~~~~~~----------------~~~~ 59 (351) T d1f0ka_ 1 KRLMVMAG-GT--GGHVFPGLAVAHHLMA--QGWQVRWLGTADRMEADLVPKHGIEIDFI----------------RISG 59 (351) T ss_dssp CEEEEECC-SS--HHHHHHHHHHHHHHHT--TTCEEEEEECTTSTHHHHGGGGTCEEEEC----------------CCCC T ss_pred CEEEEECC-CC--HHHHHHHHHHHHHHHH--CCCEEEEEEECCCCHHHCCCCCCCCEEEE----------------ECCC T ss_conf 97999838-85--8989999999999985--89989999958832432235049957999----------------7888 Q ss_pred CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf 88865301110123456745699999999863998899948825789999999999851899628852 Q gi|254780227|r 106 VKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGL 173 (426) Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~e~~~~~~~~i~vigi 173 (426) ........... ........+......+++.+-+.++..+++-+......- ...++|++.+ T Consensus 60 ~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a------~~~~ip~~~~ 119 (351) T d1f0ka_ 60 LRGKGIKALIA--APLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAA------WSLGIPVVLH 119 (351) T ss_dssp CTTCCHHHHHT--CHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHH------HHTTCCEEEE T ss_pred CCCCCHHHHHH--HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH------HHCCCCEEEC T ss_conf 67777799999--998877767777887631344300110322113445455------4056434632 No 64 >d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} Probab=21.61 E-value=18 Score=13.06 Aligned_cols=39 Identities=15% Similarity=0.074 Sum_probs=22.7 Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEE Q ss_conf 76337999836877514899999999999985-699789998 Q gi|254780227|r 27 MVAHKVAFLTAGGIAPCLSSIIGMLINHYNKI-LPKAELIYY 67 (426) Q Consensus 27 ~~~krI~IltsGG~aPG~N~~I~~iv~~a~~~-~~~~~v~G~ 67 (426) |+ |||+||. ||+++==.-.+.+.-.-++.+ ..+++++-+ T Consensus 1 M~-~kI~vl~-GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i 40 (96) T d1iowa1 1 MT-DKIAVLL-GGTSAEREVSLNSGAAVLAGLREGGIDAYPV 40 (96) T ss_dssp CC-CEEEEEC-CCSSTTHHHHHHHHHHHHHHHHHTTCEEEEE T ss_pred CC-CEEEEEE-CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEE T ss_conf 98-4599995-7576224768866999999998759257640 No 65 >d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]} Probab=21.31 E-value=18 Score=13.02 Aligned_cols=23 Identities=13% Similarity=-0.026 Sum_probs=19.2 Q ss_pred HHHHHHHHHHHHCCCCEEEEECC Q ss_conf 56999999998639988999488 Q gi|254780227|r 125 NPLEVSAHHLMQSGVTILHTIGG 147 (426) Q Consensus 125 ~~~~~~~~~l~~~~Id~Li~IGG 147 (426) ..++++.+.+++++||+|++... T Consensus 25 ~Rl~klr~~m~~~giDalli~~~ 47 (155) T d1chma1 25 NRQARLRAHLAAENIDAAIFTSY 47 (155) T ss_dssp HHHHHHHHHHHHTTCSEEEECSH T ss_pred HHHHHHHHHHHHCCCCEEEEECC T ss_conf 99999999999869999999441 No 66 >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Probab=20.63 E-value=19 Score=12.93 Aligned_cols=24 Identities=0% Similarity=-0.040 Sum_probs=11.6 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEE Q ss_conf 75148999999999999856997899 Q gi|254780227|r 40 IAPCLSSIIGMLINHYNKILPKAELI 65 (426) Q Consensus 40 ~aPG~N~~I~~iv~~a~~~~~~~~v~ 65 (426) |+.|=-+....+.+.+... |++|. T Consensus 10 P~~gH~~p~l~la~~L~~r--GH~Vt 33 (450) T d2c1xa1 10 PFSTHAAPLLAVVRRLAAA--APHAV 33 (450) T ss_dssp CSSSSHHHHHHHHHHHHHH--CTTSE T ss_pred HHHHHHHHHHHHHHHHHHC--CCCEE T ss_conf 6575899999999999977--99689 No 67 >d1lbaa_ d.118.1.1 (A:) Bacteriophage T7 lysozyme (Zn amidase) {Bacteriophage T7 [TaxId: 10760]} Probab=20.10 E-value=20 Score=12.86 Aligned_cols=35 Identities=14% Similarity=0.033 Sum_probs=19.0 Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHH Q ss_conf 99999999998518996288522223477222114633565 Q gi|254780227|r 152 TTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALT 192 (426) Q Consensus 152 ~~a~~L~e~~~~~~~~i~vigiPKTIDNDi~~td~tiGfdT 192 (426) ..+..|..++..+...-.|+|- +|+..+. ||||+- T Consensus 97 ~al~~L~~~l~~~~p~~~I~gH-----~d~~~k~-CPGf~~ 131 (146) T d1lbaa_ 97 QSLRSLLVTLLAKYEGAVLRAH-----HEVAPKA-CPSFDL 131 (146) T ss_dssp HHHHHHHHHHHHHSTTCEEEEG-----GGTSSSC-TTSBCH T ss_pred HHHHHHHHHHHHHCCCCEEEEC-----CCCCCCC-CCCCCH T ss_conf 9999999999976899899805-----6889988-969589 Done!