HHsearch alignment for GI: 254780229 and conserved domain: COG0210
>COG0210 UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].
Probab=96.97 E-value=0.044 Score=36.62 Aligned_cols=151 Identities=22% Similarity=0.270 Sum_probs=94.9
Q ss_pred CCCCCEEEECCHHHCCHHH--HHHHHHH-CCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHH--C
Q ss_conf 2541078860632369899--8898861-182899607786686201100013444432011014400079999975--5
Q gi|254780229|r 1359 DVKFDLVIMDESSQIKPED--ALGVIAR-GKQIVVVGDPKQLPPTRFFDHDNDQEDYDEEVAAVSQTESILDALLPL--F 1433 (1775)
Q Consensus 1359 ~~~FD~VI~DEASQ~~~~~--al~al~r-akqvvvvGD~kQlpPt~ff~~~~~~~~~~~~~~~~~~~eSild~~~~~--~ 1433 (1775)
T Consensus 211 ~~rf~~iLvDE~QDtn~~Q~~ll~~la~~~~~l~~VGD~dQsIY~--frG--------------A~~~ni~~f~~df~~~ 274 (655)
T COG0210 211 QARFRYILVDEFQDTNPLQYELLKLLAGNAANLFVVGDDDQSIYG--FRG--------------ADPENILDFEKDFPAA 274 (655)
T ss_pred HHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEE--ECC--------------CCCHHHHHHHHHCCCC
T ss_conf 956898987877785187999999984487757998589873676--778--------------7836789787635655
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEE-ECCC---CCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 87520530557997899999850369804764687766666884899-7289---7217888989999999999999531
Q gi|254780229|r 1434 SMRRLQWHYRSLNENLIACSNYYFYDNSLIVFPSPYTSVDRYGVGFT-HVKN---GVVVDQGNPEEARVIALAVKDHALR 1509 (1775)
Q Consensus 1434 p~~~L~~HyRs~~e~lI~fSN~~fY~~~L~~~psp~~~~~~~~v~~~-~v~~---g~~~~~~N~~EA~~vv~~v~~~~~~ 1509 (1775)
T Consensus 275 ~~i~Le~nyRSt~-~Il~~An~~i~~n~~r-~~--------k~l~~~~~~~~~~~~~~~~~~~~~ea~~i~~~I~~l~~~ 344 (655)
T COG0210 275 KVIKLEQNYRSTP-NILAAANKVIANNKKR-QA--------KTLRTEVEGSGEKVVLLLANDEEDEARWIASEIDALIEI 344 (655)
T ss_pred CEEECCCCCCCHH-HHHHHHHHHHHHCCCC-CC--------CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 4676042448889-9999999998718652-33--------421102356778856986788177899999999999982
Q ss_pred C--CCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 8--5771899819989999999999999
Q gi|254780229|r 1510 Y--PEESLGVIAMNAKQRDLIESTINKL 1535 (1775)
Q Consensus 1510 ~--~~~siGVvt~~~~Q~~~I~~~l~~~ 1535 (1775)
T Consensus 345 ~~~~~~d~aiL~R~n~~s~~~e~~l~~~ 372 (655)
T COG0210 345 GKVNYSDIAILYRTNAQSRLIEEALRAA 372 (655)
T ss_pred CCCCCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 6888030788861566778899998662