HHsearch alignment for GI: 254780229 and conserved domain: COG0552

>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion].

Probab=95.94  E-value=0.013  Score=42.07  Aligned_cols=72  Identities=25%  Similarity=0.338  Sum_probs=45.6

Q ss_pred             EEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH-HHHHHHHHH
Q ss_conf             994287877038999999999967982899601---058999999864435844136540266110899-999999998
Q gi|254780229|r  423 IIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQ---KMAAIEVVRHRLEKAGLGEFCLELHSHKVHKRA-ILDDLRKRI  497 (1775)
Q Consensus       423 vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVae---K~aALdVV~~RL~~~gLg~~cleLHs~ka~k~~-vl~~L~~~l  497 (1775)
T Consensus       143 l~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv--~vI~~~-~G~DpAaVafDAi~~Ak  218 (340)
T COG0552         143 LFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGV--PVISGK-EGADPAAVAFDAIQAAK  218 (340)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCC--EEECCC-CCCCCHHHHHHHHHHHH
T ss_conf             99934888637179999999997898699982334789999999999999599--278259-99980899999999999