HHsearch alignment for GI: 254780229 and conserved domain: COG1201

>COG1201 Lhr Lhr-like helicases [General function prediction only].
Probab=96.01  E-value=0.024  Score=39.40  Aligned_cols=62  Identities=27%  Similarity=0.448  Sum_probs=43.7

Q ss_pred             HHHHHHHHHCCCCEEEECCCCCCCHHHH-HHHHHHHHHC-------CCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf             8999998514895599428787703899-9999999967-------982899601058999999864435
Q gi|254780229|r  409 QHSAVIDVINGKNLIIEGPPGTGKSQTI-TNIIAAAMLH-------GKKILFCAQKMAAIEVVRHRLEKA  470 (1775)
Q Consensus       409 Q~~av~~~~~g~~~vi~GPPGTGKSQTI-aNlIa~~la~-------Gk~VLfVaeK~aALdVV~~RL~~~  470 (1775)
T Consensus        27 Q~~a~~~i~~G~nvLiiAPTGsGKTeAAfLpil~~l~~~~~~~~~~~i~~lYIsPLkALn~Di~~rL~~~   96 (814)
T COG1201          27 QRYAIPEIHSGENVLIIAPTGSGKTEAAFLPVINELLSLGKGKLEDGIYALYISPLKALNNDIRRRLEEP   96 (814)
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf             9999999858984699868999737999999999998606888888569999570788878999999999