HHsearch alignment for GI: 254780229 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=95.88 E-value=0.032 Score=38.09 Aligned_cols=95 Identities=25% Similarity=0.413 Sum_probs=53.0
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 48955994287877038999999999967982899601058999999864435844136540266110899999999998
Q gi|254780229|r 418 NGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAGLGEFCLELHSHKVHKRAILDDLRKRI 497 (1775)
Q Consensus 418 ~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~gLg~~cleLHs~ka~k~~vl~~L~~~l 497 (1775)
T Consensus 150 APknVLFyGppGTGKT-----m~Akalane~kvp~l~vkat~l-----------iGehV-----Gdga--r~Ihely~rA 206 (368)
T COG1223 150 APKNVLFYGPPGTGKT-----MMAKALANEAKVPLLLVKATEL-----------IGEHV-----GDGA--RRIHELYERA 206 (368)
T ss_pred CCCEEEEECCCCCCHH-----HHHHHHHCCCCCCEEEECHHHH-----------HHHHH-----HHHH--HHHHHHHHHH
T ss_conf 7541687789996487-----9999872545785487116888-----------88774-----3598--9999999988
Q ss_pred HHHCCC-CCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 631124-7158999--9999999999999999999997885
Q gi|254780229|r 498 DNRNIK-TVPQEID--VEITRYEELKGQLNQYAQEINQIWK 535 (1775)
Q Consensus 498 e~~~~~-~~~~e~e--~~~~~L~~~r~~L~~~~~~L~~~~~ 535 (1775)
T Consensus 207 ~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelD 247 (368)
T COG1223 207 RKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELD 247 (368)
T ss_pred HHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 75198499840024555304578864549999999998501