HHsearch alignment for GI: 254780229 and conserved domain: COG3598

>COG3598 RepA RecA-family ATPase [DNA replication, recombination, and repair].
Probab=94.86  E-value=0.092  Score=33.31  Aligned_cols=59  Identities=25%  Similarity=0.390  Sum_probs=39.9

Q ss_pred             HHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC-----------EEEEEEC---CHHHHHHHHHHHHHCCCCCE
Q ss_conf             514895599428787703899999999996798-----------2899601---05899999986443584413
Q gi|254780229|r  416 VINGKNLIIEGPPGTGKSQTITNIIAAAMLHGK-----------KILFCAQ---KMAAIEVVRHRLEKAGLGEF  475 (1775)
Q Consensus       416 ~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk-----------~VLfVae---K~aALdVV~~RL~~~gLg~~  475 (1775)
T Consensus        86 fr~g~~~~~~gdsg~GKt-tllL~l~IalaaG~~lfG~~v~epGkvlyvslEl~re~~L~Rl~~v~a~mgLsPa  158 (402)
T COG3598          86 FRKGYVSILYGDSGVGKT-TLLLYLCIALAAGKNLFGNKVKEPGKVLYVSLELYREDILERLEPVRARMGLSPA  158 (402)
T ss_pred             HHCCEEEEEECCCCCCHH-HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHH
T ss_conf             651705898448862376-8999999999864777453355888079998226868899999999987099857