HHsearch alignment for GI: 254780229 and conserved domain: COG3973

Probab=97.41  E-value=0.0094  Score=43.66  Aligned_cols=214  Identities=18%  Similarity=0.192  Sum_probs=124.7

Q ss_pred             CCCCEEEECCHHHCCHH--HHHHHHHHCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHH--CCC
Q ss_conf             54107886063236989--98898861182899607786686201100013444432011014400079999975--587
Q gi|254780229|r 1360 VKFDLVIMDESSQIKPE--DALGVIARGKQIVVVGDPKQLPPTRFFDHDNDQEDYDEEVAAVSQTESILDALLPL--FSM 1435 (1775)
Q Consensus      1360 ~~FD~VI~DEASQ~~~~--~al~al~rakqvvvvGD~kQlpPt~ff~~~~~~~~~~~~~~~~~~~eSild~~~~~--~p~ 1435 (1775)
T Consensus       527 ~~~kh~vIDeaqdys~~q~~~~r~l~~~as~tivgd~gq~i~----~-----------~~~e~~~~e~~~~~fed~~~e~  591 (747)
T COG3973         527 RRLKHTVIDEAQDYSRFQFTDNRTLAERASMTIVGDYGQVIY----D-----------EAQELSPMERMDVFFEDPSFEY  591 (747)
T ss_pred             CCCCCEEECHHHHCCHHHHHHHHHHHHHCCCEEECCCCCEEH----H-----------HHCCCCHHHHHHHHHHCCCCHH
T ss_conf             203322551344334024588764432036447624785532----2-----------0122687999888872897054


Q ss_pred             CEECCCCCCCCHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             5205305579978999998503698047646-877666668848997289721788898999999999999953185771
Q gi|254780229|r 1436 RRLQWHYRSLNENLIACSNYYFYDNSLIVFP-SPYTSVDRYGVGFTHVKNGVVVDQGNPEEARVIALAVKDHALRYPEES 1514 (1775)
Q Consensus      1436 ~~L~~HyRs~~e~lI~fSN~~fY~~~L~~~p-sp~~~~~~~~v~~~~v~~g~~~~~~N~~EA~~vv~~v~~~~~~~~~~s 1514 (1775)
T Consensus       592 v~l~~syrSt~e-I~efan~~l~d~----~~~~p~~rsge~p~~i~~--------~~ne~l~qr~~-~ii~~mkk~~~et  657 (747)
T COG3973         592 VGLIASYRSTAE-IDEFANSLLPDR----FRIHPLTRSGEKPAVIMS--------VANEELVQRNP-DIIPRMKKRGSET  657 (747)
T ss_pred             HHHHHHHCCHHH-HHHHHHHHCCCC----CCCCHHHCCCCCCEEEEC--------CCHHHHHHHHH-HHHHHHHHCCCCC
T ss_conf             324565258588-999999863277----766612117887622111--------13398987507-7888887527871


Q ss_pred             EEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             89981998999999999999931297689997641147898585425680866678899996650788887620011477
Q gi|254780229|r 1515 LGVIAMNAKQRDLIESTINKLCRKDSEVEKAISKLRMHADPFFIKNLENVQGDERDRIFISFTYGPHEPGGRVFQRFGPI 1594 (1775)
Q Consensus      1515 iGVvt~~~~Q~~~I~~~l~~~~~~~~~~~~~~~~~~~~~e~~fvknle~vQGdERDvI~~S~~yg~~~~~g~~~~~fGpl 1594 (1775)
T Consensus       658 iaVi~kt~~d~~~~~d~lre~~~~r-~I~k~nq-~f~~~~~v--ipvy~aKGlEFD~vi---v~d~s~----------~e  720 (747)
T COG3973         658 IAVICKTDHDCKAVMDSLREKDSQR-TIAKENQ-RFHHGSDV--IPVYDAKGLEFDHVI---VVDPSI----------VE  720 (747)
T ss_pred             EEEECCCHHHHHHHHHHHHHCCHHH-HHHHHCC-CCCCCCEE--EEEEECCCCEEEEEE---EECCHH----------HC
T ss_conf             6997776789999999874201145-7876156-66478248--882202563000489---964113----------02


Q ss_pred             CCCCHHHHHHHHHHHHCCEEEEEEC
Q ss_conf             7656246899999832142698870
Q gi|254780229|r 1595 NSDIGWRRLNVLFTRSRRRIEVFST 1619 (1775)
Q Consensus      1595 n~~gg~rRlNVa~sRAr~~~~v~~s 1619 (1775)
T Consensus       721 ~te~~~r~LYva~TRAlh~l~if~~  745 (747)
T COG3973         721 ETEQDLRDLYVAVTRALHSLYIFGE  745 (747)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             5633305689999999989888506