HHsearch alignment for GI: 254780229 and conserved domain: COG4581

>COG4581 Superfamily II RNA helicase [DNA replication, recombination, and repair].

Probab=96.39  E-value=0.035  Score=37.66  Aligned_cols=67  Identities=19%  Similarity=0.303  Sum_probs=55.5

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH-HHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf             3667734689999985148955994287877038999-9999999679828996010589999998644
Q gi|254780229|r  401 LIDDSDSSQHSAVIDVINGKNLIIEGPPGTGKSQTIT-NIIAAAMLHGKKILFCAQKMAAIEVVRHRLE  468 (1775)
Q Consensus       401 ~~~~aDsSQ~~av~~~~~g~~~vi~GPPGTGKSQTIa-NlIa~~la~Gk~VLfVaeK~aALdVV~~RL~  468 (1775)
T Consensus       116 ~~F~LD~fQ~~a~~~Ler~esVlV~ApTssGKT-vVaeyAi~~al~~~qrviYTsPIKALsNQKyrdl~  183 (1041)
T COG4581         116 YPFELDPFQQEAIAILERGESVLVCAPTSSGKT-VVAEYAIALALRDGQRVIYTSPIKALSNQKYRDLL  183 (1041)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC-HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
T ss_conf             898967899999999847995799733789855-59999999998718944861630664206799999