HHsearch alignment for GI: 254780229 and conserved domain: PRK00254

>PRK00254 ski2-like helicase; Provisional.
Probab=96.97  E-value=0.008  Score=44.36  Aligned_cols=61  Identities=28%  Similarity=0.374  Sum_probs=45.9

Q ss_pred             CHHHHHHHHH-HHCCCCEEEECCCCCCCHHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             3468999998-51489559942878770389999999--99967982899601058999999864
Q gi|254780229|r  406 DSSQHSAVID-VINGKNLIIEGPPGTGKSQTITNIIA--AAMLHGKKILFCAQKMAAIEVVRHRL  467 (1775)
Q Consensus       406 DsSQ~~av~~-~~~g~~~vi~GPPGTGKSQTIaNlIa--~~la~Gk~VLfVaeK~aALdVV~~RL  467 (1775)
T Consensus        25 ~p~Q~e~l~~g~~~g~NllvsaPT~sGKT-lvAElail~~~l~~~~k~iyi~P~kALa~EK~~~f   88 (717)
T PRK00254         25 YPPQAEALTSGVLEGKNLLIAIPTASGKT-LIAEIAMVNKLLREGGKAVYLVPLKALAEEKFREF   88 (717)
T ss_pred             CHHHHHHHHHHHCCCCCEEEECCCCCCHH-HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
T ss_conf             89999998742336981899899887489-99999999999852992999926799999999999