HHsearch alignment for GI: 254780229 and conserved domain: PRK00254
>PRK00254 ski2-like helicase; Provisional.
Probab=96.97 E-value=0.008 Score=44.36 Aligned_cols=61 Identities=28% Similarity=0.374 Sum_probs=45.9
Q ss_pred CHHHHHHHHH-HHCCCCEEEECCCCCCCHHHHHHHHH--HHHHCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 3468999998-51489559942878770389999999--99967982899601058999999864
Q gi|254780229|r 406 DSSQHSAVID-VINGKNLIIEGPPGTGKSQTITNIIA--AAMLHGKKILFCAQKMAAIEVVRHRL 467 (1775)
Q Consensus 406 DsSQ~~av~~-~~~g~~~vi~GPPGTGKSQTIaNlIa--~~la~Gk~VLfVaeK~aALdVV~~RL 467 (1775)
T Consensus 25 ~p~Q~e~l~~g~~~g~NllvsaPT~sGKT-lvAElail~~~l~~~~k~iyi~P~kALa~EK~~~f 88 (717)
T PRK00254 25 YPPQAEALTSGVLEGKNLLIAIPTASGKT-LIAEIAMVNKLLREGGKAVYLVPLKALAEEKFREF 88 (717)
T ss_pred CHHHHHHHHHHHCCCCCEEEECCCCCCHH-HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH
T ss_conf 89999998742336981899899887489-99999999999852992999926799999999999