HHsearch alignment for GI: 254780229 and conserved domain: PRK05703
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=96.81 E-value=0.0068 Score=45.08 Aligned_cols=56 Identities=25% Similarity=0.490 Sum_probs=40.0
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHH-HHCCC-EEEEEE---CCHHHHHHHHHHHHHCCCC
Q ss_conf 48955994287877038999999999-96798-289960---1058999999864435844
Q gi|254780229|r 418 NGKNLIIEGPPGTGKSQTITNIIAAA-MLHGK-KILFCA---QKMAAIEVVRHRLEKAGLG 473 (1775)
Q Consensus 418 ~g~~~vi~GPPGTGKSQTIaNlIa~~-la~Gk-~VLfVa---eK~aALdVV~~RL~~~gLg 473 (1775)
T Consensus 209 ~~~vvalVGPTGVGKTTTiAKLAA~~~l~~~~~kV~lIT~DtyRigA~eQLk~Ya~ilgvp 269 (412)
T PRK05703 209 QGGVVALVGPTGVGKTTTLAKLAARYALEEGKDKVALITLDTYRIGAVEQLKTYAKIMGIP 269 (412)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCE
T ss_conf 6736999888887567699999999999729981799983767777999999999971973