HHsearch alignment for GI: 254780229 and conserved domain: PRK06067
>PRK06067 flagellar accessory protein FlaH; Validated.
Probab=96.76 E-value=0.0027 Score=49.36 Aligned_cols=53 Identities=25% Similarity=0.285 Sum_probs=38.2
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 489559942878770389999999999679828996010589999998644358
Q gi|254780229|r 418 NGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAG 471 (1775)
Q Consensus 418 ~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~g 471 (1775)
T Consensus 31 ~g~~~li~G~~G~GKt~~~~~f~~~~~~~g~~~~~~~~ee~~~~~-~~~~~~~g 83 (241)
T PRK06067 31 FGSLILIEGENDTGKSVLSQQFVWGALNQGKRGLAITTENTSKSY-LKQMESLK 83 (241)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH-HHHHHHCC
T ss_conf 990899980799887999999999998679829999942899999-99999839