HHsearch alignment for GI: 254780229 and conserved domain: PRK06893

>PRK06893 DNA replication initiation factor; Validated.
Probab=95.55  E-value=0.027  Score=38.85  Aligned_cols=57  Identities=19%  Similarity=0.345  Sum_probs=36.1

Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHH-HHHCCCEEEEEECCHHH-H-HHHHHHHHHCCCCCEEEE
Q ss_conf             895599428787703899999999-99679828996010589-9-999986443584413654
Q gi|254780229|r  419 GKNLIIEGPPGTGKSQTITNIIAA-AMLHGKKILFCAQKMAA-I-EVVRHRLEKAGLGEFCLE  478 (1775)
Q Consensus       419 g~~~vi~GPPGTGKSQTIaNlIa~-~la~Gk~VLfVaeK~aA-L-dVV~~RL~~~gLg~~cle  478 (1775)
T Consensus        39 ~~~l~i~G~~gsGKTH-LLqa~~~~~~~~~~~~~yi~~~~~~~~~~~~l~~l~~--~d~l~iD   98 (229)
T PRK06893         39 QPFFYIWGGKSSGKSH-LLKAVSNHYLLNQRTAIYIPLSKSQYFSPAVLENLEQ--QDLVCLD   98 (229)
T ss_pred             CCEEEEECCCCCCHHH-HHHHHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHHH--CCEEEEE
T ss_conf             9879998999998899-9999999999718985999737756406999987654--7979996