HHsearch alignment for GI: 254780229 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=97.57 E-value=0.00015 Score=62.46 Aligned_cols=46 Identities=37% Similarity=0.604 Sum_probs=34.9
Q ss_pred HHHHHH----HHHHCCCCEEEECCCCCCCHHHHHHHHH-HHHHCCCEEEEEE
Q ss_conf 689999----9851489559942878770389999999-9996798289960
Q gi|254780229|r 408 SQHSAV----IDVINGKNLIIEGPPGTGKSQTITNIIA-AAMLHGKKILFCA 454 (1775)
Q Consensus 408 SQ~~av----~~~~~g~~~vi~GPPGTGKSQTIaNlIa-~~la~Gk~VLfVa 454 (1775)
T Consensus 91 ~~i~~L~~~~~fi~~~~Nvil~Gp~GtGKTh-LA~Alg~~A~~~G~~V~f~~ 141 (269)
T PRK08181 91 AQVMALAAGDSWLAKGANLLLFGPPGGGKSH-LAAAIGLALIENGWRVLFTR 141 (269)
T ss_pred HHHHHHHCCCHHHHCCCEEEEECCCCCCHHH-HHHHHHHHHHHCCCEEEEEE
T ss_conf 9999996567588648708998999987889-99999999998799399978