HHsearch alignment for GI: 254780229 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=97.52  E-value=0.00018  Score=61.45  Aligned_cols=45  Identities=22%  Similarity=0.420  Sum_probs=35.7

Q ss_pred             HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH-HHHCCCEEEEEE
Q ss_conf             8999998514895599428787703899999999-996798289960
Q gi|254780229|r  409 QHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAA-AMLHGKKILFCA  454 (1775)
Q Consensus       409 Q~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~-~la~Gk~VLfVa  454 (1775)
T Consensus        91 ~La~~~fi~~~~Nvil~G~~GtGKT-hLA~Alg~~A~~~G~~v~f~~  136 (258)
T PRK09183         91 SLRSLSFIERNENIVLLGPSGVGKT-HLAIALGYEAVRAGIKVRFTT  136 (258)
T ss_pred             HHHCCCHHHCCCCEEEECCCCCCHH-HHHHHHHHHHHHCCCEEEEEE
T ss_conf             8825816655886799899998689-999999999998799399978