HHsearch alignment for GI: 254780229 and conserved domain: PRK09862
>PRK09862 putative ATP-dependent protease; Provisional.
Probab=96.12 E-value=0.005 Score=46.53 Aligned_cols=47 Identities=32% Similarity=0.565 Sum_probs=33.7
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Q ss_conf 6899999851489559942878770389999999999679828996010589999
Q gi|254780229|r 408 SQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEV 462 (1775)
Q Consensus 408 SQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdV 462 (1775)
T Consensus 199 akraleIAAAGgHnlLl~GpPG~GKT-MlA~rlp~ILPp----L---t~~e~lEv 245 (506)
T PRK09862 199 GKRGLEITAAGGHNLLLIGPPGTGKT-MLASRINGLLPD----L---SNEEALES 245 (506)
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCHH-HHHHHHHHCCCC----C---CHHHHHHH
T ss_conf 99999997446886598769994598-999775123899----8---98999999