HHsearch alignment for GI: 254780229 and conserved domain: PRK10875
>PRK10875 recD exonuclease V subunit alpha; Provisional.
Probab=98.16 E-value=4.8e-06 Score=77.93 Aligned_cols=54 Identities=20% Similarity=0.382 Sum_probs=39.6
Q ss_pred CCCEEECCHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECC
Q ss_conf 89858542568086667889999665078888762001147776562468999998321426988703
Q gi|254780229|r 1553 ADPFFIKNLENVQGDERDRIFISFTYGPHEPGGRVFQRFGPINSDIGWRRLNVLFTRSRRRIEVFSTM 1620 (1775)
Q Consensus 1553 ~e~~fvknle~vQGdERDvI~~S~~yg~~~~~g~~~~~fGpln~~gg~rRlNVa~sRAr~~~~v~~s~ 1620 (1775)
T Consensus 528 ~e~AYAmTVHKSQGSEF~~V~lvL---P~~-~s~l------LtR----eLlYTAITRAk~~l~lvg~~ 581 (607)
T PRK10875 528 HETAWAMTVHKSQGSEFDHAALIL---PSQ-RTPV------VTR----ELVYTAITRARRRLSLYADE 581 (607)
T ss_pred CCEEEEEEEECCCCCCCCCEEEEE---CCC-CCCC------CCH----HHHHHHHHHHHCEEEEEECH
T ss_conf 577988555535211779679990---587-6752------529----89999987665068999899