HHsearch alignment for GI: 254780229 and conserved domain: PRK11054

>PRK11054 helD DNA helicase IV; Provisional.
Probab=97.63  E-value=0.00024  Score=60.17  Aligned_cols=64  Identities=25%  Similarity=0.370  Sum_probs=55.6

Q ss_pred             CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHH
Q ss_conf             773468999998514895599428787703899999999996798----289960105899999986443
Q gi|254780229|r  404 DSDSSQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLHGK----KILFCAQKMAAIEVVRHRLEK  469 (1775)
Q Consensus       404 ~aDsSQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk----~VLfVaeK~aALdVV~~RL~~  469 (1775)
T Consensus       196 PLn~~Qr~Avi~-~ed~~LVLAGA-GSGKT~vLt~RiayLI~~g~~~P~~ILaLTFT~kAA~EMreRl~~  263 (684)
T PRK11054        196 PLNPSQARAVVN-GEDSLLVLAGA-GSGKTSVLVARAGWLLARGQAQPEQILLLAFGRKAAEEMDERIRE  263 (684)
T ss_pred             CCCHHHHHHEEE-CCCCEEEEECC-CCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHHH
T ss_conf             999899957274-79964898338-997077999999999975999866778686349999999999997