HHsearch alignment for GI: 254780229 and conserved domain: PRK11664

>PRK11664 ATP-dependent RNA helicase HrpB; Provisional.
Probab=96.42  E-value=0.016  Score=41.37  Aligned_cols=62  Identities=19%  Similarity=0.366  Sum_probs=34.1

Q ss_pred             CCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH-HHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             734689999985148955994287877038999-999999967982899601058999999864
Q gi|254780229|r  405 SDSSQHSAVIDVINGKNLIIEGPPGTGKSQTIT-NIIAAAMLHGKKILFCAQKMAAIEVVRHRL  467 (1775)
Q Consensus       405 aDsSQ~~av~~~~~g~~~vi~GPPGTGKSQTIa-NlIa~~la~Gk~VLfVaeK~aALdVV~~RL  467 (1775)
T Consensus         6 i~~~~~~i~~~l~~~~~~vl~a~tGsGKtTqvP~~ll~~~~~~g-~I~~~qPRR~AA~s~A~Rv   68 (812)
T PRK11664          6 VAAVLPELLTALKTAPQVLLKAPTGAGKSTWLPLQLLQQGGING-KIIMLEPRRLAARNVAQRL   68 (812)
T ss_pred             HHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCC-CEEEECCHHHHHHHHHHHH
T ss_conf             47899999999997997999908999989999999996468899-3899388399999999999