HHsearch alignment for GI: 254780229 and conserved domain: PRK11776

>PRK11776 ATP-dependent RNA helicase DbpA; Provisional.
Probab=95.44  E-value=0.19  Score=30.15  Aligned_cols=33  Identities=12%  Similarity=0.338  Sum_probs=24.2

Q ss_pred             CCEEEECHHHHHHHCCCCCCC---CCEEEECCHHHC
Q ss_conf             678992577998725852254---107886063236
Q gi|254780229|r 1341 KPCFMMSPMSVANYLEPKDVK---FDLVIMDESSQI 1373 (1775)
Q Consensus      1341 ~P~~~msp~sva~~l~~~~~~---FD~VI~DEASQ~ 1373 (1775)
T Consensus       124 ~~IvV~TPGRl~d~l~~~~l~l~~v~~lVlDEAD~m  159 (459)
T PRK11776        124 AHIIVGTPGRILDHLRKGTLDLDALNTLVLDEADRM  159 (459)
T ss_pred             CCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCHHH
T ss_conf             999998958999887516632231038997062454