HHsearch alignment for GI: 254780229 and conserved domain: PRK11823

>PRK11823 DNA repair protein RadA; Provisional.
Probab=96.42  E-value=0.02  Score=40.17  Aligned_cols=73  Identities=32%  Similarity=0.477  Sum_probs=43.8

Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf             8955994287877038999999999967982899601058999999864435844136540266110899999999
Q gi|254780229|r  419 GKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAGLGEFCLELHSHKVHKRAILDDLR  494 (1775)
Q Consensus       419 g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~gLg~~cleLHs~ka~k~~vl~~L~  494 (1775)
T Consensus        90 GS~iLlgGePGIGKS-TLlLQ~a~~la~~~~vLYvSGEES~~Q-ik~RA~RLg~~~~~l~l~~e-t~l~~Il~~i~  162 (454)
T PRK11823         90 GSVVLIGGDPGIGKS-TLLLQVAAALAAGGKVLYVSGEESLQQ-IKLRAERLGLPSDNLYLLAE-TNLEDILATIE  162 (454)
T ss_pred             CEEEEECCCCCCCHH-HHHHHHHHHHHCCCCEEEECCCHHHHH-HHHHHHHHCCCCCCCEEEEC-CCHHHHHHHHH
T ss_conf             648995079988899-999999999855995799815015789-99999975888887378853-68999999998