HHsearch alignment for GI: 254780229 and conserved domain: PRK12724

>PRK12724 flagellar biosynthesis regulator FlhF; Provisional.
Probab=96.36  E-value=0.0067  Score=45.15  Aligned_cols=53  Identities=28%  Similarity=0.533  Sum_probs=39.1

Q ss_pred             CCEEEECCCCCCCHHHHHHHHHHHH-HCCCEEEEEE---CCHHHHHHHHHHHHHCCC
Q ss_conf             9559942878770389999999999-6798289960---105899999986443584
Q gi|254780229|r  420 KNLIIEGPPGTGKSQTITNIIAAAM-LHGKKILFCA---QKMAAIEVVRHRLEKAGL  472 (1775)
Q Consensus       420 ~~~vi~GPPGTGKSQTIaNlIa~~l-a~Gk~VLfVa---eK~aALdVV~~RL~~~gL  472 (1775)
T Consensus       224 kvi~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvEQLktYa~Il~i  280 (432)
T PRK12724        224 KVVFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGM  280 (432)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf             299998999988899999999999997499279995266537799999999998599