HHsearch alignment for GI: 254780229 and conserved domain: PRK12726

>PRK12726 flagellar biosynthesis regulator FlhF; Provisional.
Probab=96.69  E-value=0.0024  Score=49.75  Aligned_cols=60  Identities=18%  Similarity=0.309  Sum_probs=46.0

Q ss_pred             HHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHHHHCCC
Q ss_conf             9985148955994287877038999999999967982899601---05899999986443584
Q gi|254780229|r  413 VIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQ---KMAAIEVVRHRLEKAGL  472 (1775)
Q Consensus       413 v~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVae---K~aALdVV~~RL~~~gL  472 (1775)
T Consensus       200 ~~~l~~g~VIaLVGvnGvGKTTTiAKLA~~l~~~gkkV~LVAaDTFRaAAiEQLk~~g~rlgV  262 (407)
T PRK12726        200 SFDLSNHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDV  262 (407)
T ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf             023036908999899989789999999999997799179997066778899999999999796