HHsearch alignment for GI: 254780229 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.

Probab=97.51  E-value=0.00061  Score=56.05  Aligned_cols=37  Identities=35%  Similarity=0.485  Sum_probs=29.0

Q ss_pred             HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             68999998514895599428787703899999999996
Q gi|254780229|r  408 SQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAML  445 (1775)
Q Consensus       408 SQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la  445 (1775)
T Consensus        41 ~~Lrr~i~~~~~~S~Il~GPPGtGKT-TLA~iIA~~t~   77 (726)
T PRK13341         41 RLLRRAIKADRVGSLILYGPPGVGKT-TLARIIANHTR   77 (726)
T ss_pred             CHHHHHHHCCCCCEEEEECCCCCCHH-HHHHHHHHHHC
T ss_conf             28999997699982788897999999-99999988748