HHsearch alignment for GI: 254780229 and conserved domain: PRK13540

>PRK13540 cytochrome c biogenesis protein CcmA; Provisional.
Probab=94.61  E-value=0.027  Score=38.82  Aligned_cols=41  Identities=32%  Similarity=0.480  Sum_probs=33.1

Q ss_pred             HHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCEEEEEECC
Q ss_conf             8514895599428787703899999999996-79828996010
Q gi|254780229|r  415 DVINGKNLIIEGPPGTGKSQTITNIIAAAML-HGKKILFCAQK  456 (1775)
Q Consensus       415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~Gk~VLfVaeK  456 (1775)
T Consensus        23 ~i~~G~i~~l~G~NGaGKS-TLlkli~Gl~~p~~G~I~~~~~~   64 (200)
T PRK13540         23 HLPAGGLLHLKGSNGAGKT-TLLKLIAGLLNPEKGEILFERQS   64 (200)
T ss_pred             EECCCCEEEEECCCCCCHH-HHHHHHHCCCCCCCCEEEECCEE
T ss_conf             9879979999889998799-99999977858898569999986