HHsearch alignment for GI: 254780229 and conserved domain: PRK13826
>PRK13826 Dtr system oriT relaxase; Provisional.
Probab=96.70 E-value=0.011 Score=43.03 Aligned_cols=60 Identities=20% Similarity=0.212 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHCCCCE-EEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Q ss_conf 734689999985148955-994287877038999999999967982899601058999999
Q gi|254780229|r 405 SDSSQHSAVIDVINGKNL-IIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVR 464 (1775)
Q Consensus 405 aDsSQ~~av~~~~~g~~~-vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~ 464 (1775)
T Consensus 382 Ls~EQ~~Av~hiT~~~~Ia~VvG~AGaGKStmL~aAReawEa~GyrV~GaALsGkAAegLe 442 (1102)
T PRK13826 382 LSDEQKTAIEHVAGAERIAAVIGRAGAGKTTMMKAAREAWEAAGYRVVGGALAGKAAEGLE 442 (1102)
T ss_pred CCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
T ss_conf 8999999999853788668998428887889999999999977977980150078999775