HHsearch alignment for GI: 254780229 and conserved domain: PRK13873
>PRK13873 conjugal transfer ATPase TrbE; Provisional.
Probab=94.95 E-value=0.31 Score=27.75 Aligned_cols=44 Identities=25% Similarity=0.499 Sum_probs=29.9
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH
Q ss_conf 8955994287877038999999999967--9828996010589999998
Q gi|254780229|r 419 GKNLIIEGPPGTGKSQTITNIIAAAMLH--GKKILFCAQKMAAIEVVRH 465 (1775)
Q Consensus 419 g~~~vi~GPPGTGKSQTIaNlIa~~la~--Gk~VLfVaeK~aALdVV~~ 465 (1775)
T Consensus 442 G-HtlI~GpTGsGKT-vll~~l~~q~~ry~~~~v-f~FDkd~s~~i~~~ 487 (815)
T PRK13873 442 G-HTLVVGPTGAGKS-VLLALMALQFRRYPGSQV-FAFDFGGSIRAAAL 487 (815)
T ss_pred C-CEEEECCCCCCHH-HHHHHHHHHHHHCCCCCE-EEEECCCCHHHHHH
T ss_conf 6-4389788999899-999999999864489848-99978987899999