HHsearch alignment for GI: 254780229 and conserved domain: PRK13894
>PRK13894 conjugal transfer ATPase TrbB; Provisional.
Probab=95.94 E-value=0.012 Score=42.58 Aligned_cols=46 Identities=26% Similarity=0.492 Sum_probs=35.8
Q ss_pred HHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC---CCEEEEEECCHHHHH
Q ss_conf 985148955994287877038999999999967---982899601058999
Q gi|254780229|r 414 IDVINGKNLIIEGPPGTGKSQTITNIIAAAMLH---GKKILFCAQKMAAIE 461 (1775)
Q Consensus 414 ~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~---Gk~VLfVaeK~aALd 461 (1775)
T Consensus 144 ~~V~~r~nilI~G~TgsGKT-Tll~all~~i~~~~p~eR-ivtIED~~EL~ 192 (320)
T PRK13894 144 AAVRAHRNILVIGGTGSGKT-TLVNAIINEMVIQDPTER-VFIIEDTGEIQ 192 (320)
T ss_pred HHHHCCCCEEEECCCCCCHH-HHHHHHHHHHCCCCCCCC-EEEECCHHHHC
T ss_conf 99972875899858886568-999999863202695201-77525878807