HHsearch alignment for GI: 254780229 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=96.97 E-value=0.00051 Score=56.88 Aligned_cols=23 Identities=43% Similarity=0.928 Sum_probs=20.9
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 599428787703899999999996
Q gi|254780229|r 422 LIIEGPPGTGKSQTITNIIAAAML 445 (1775)
Q Consensus 422 ~vi~GPPGTGKSQTIaNlIa~~la 445 (1775)
T Consensus 3 I~ISGpPGSGkt-TvA~~lA~~Ls 25 (173)
T TIGR02173 3 ITISGPPGSGKT-TVAKILAEKLS 25 (173)
T ss_pred EEEECCCCCCHH-HHHHHHHHHCC
T ss_conf 887358968647-89999998639