HHsearch alignment for GI: 254780229 and conserved domain: TIGR02782

>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=95.80  E-value=0.015  Score=41.54  Aligned_cols=55  Identities=24%  Similarity=0.439  Sum_probs=38.7

Q ss_pred             CCCCCHHHHHHHH-HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-C---CEEEEEECCHHHH
Q ss_conf             6677346899999-85148955994287877038999999999967-9---8289960105899
Q gi|254780229|r  402 IDDSDSSQHSAVI-DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-G---KKILFCAQKMAAI  460 (1775)
Q Consensus       402 ~~~aDsSQ~~av~-~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-G---k~VLfVaeK~aAL  460 (1775)
T Consensus       123 imta--aQ~d~l~~Av~ar~NIlv~GGTGSGKT-TLaNAlla~I~~l~~P~dR~-vIiEDT~El  182 (315)
T TIGR02782       123 IMTA--AQRDVLREAVAARKNILVVGGTGSGKT-TLANALLAEIAKLNDPDDRV-VIIEDTAEL  182 (315)
T ss_pred             CCCH--HHHHHHHHHHHHCCCEEEECCCCCCHH-HHHHHHHHHHHHCCCCCCEE-EEEECCHHH
T ss_conf             4557--899999999971298899814588579-99999999885216999618-998547132