HHsearch alignment for GI: 254780229 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=95.00  E-value=0.023  Score=39.57  Aligned_cols=29  Identities=28%  Similarity=0.431  Sum_probs=23.6

Q ss_pred             HHCCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             514895599428787703899999999996
Q gi|254780229|r  416 VINGKNLIIEGPPGTGKSQTITNIIAAAML  445 (1775)
Q Consensus       416 ~~~g~~~vi~GPPGTGKSQTIaNlIa~~la  445 (1775)
T Consensus        40 G~~P~Ni~iYGkTGtGKT-~vt~~v~~~l~   68 (383)
T TIGR02928        40 GSRPSNIFIYGKTGTGKT-AVTKYVMKELE   68 (383)
T ss_pred             CCCCCCEEEECCCCCCHH-HHHHHHHHHHH
T ss_conf             489872588788898788-99999999999