HHsearch alignment for GI: 254780229 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=95.00 E-value=0.023 Score=39.57 Aligned_cols=29 Identities=28% Similarity=0.431 Sum_probs=23.6
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 514895599428787703899999999996
Q gi|254780229|r 416 VINGKNLIIEGPPGTGKSQTITNIIAAAML 445 (1775)
Q Consensus 416 ~~~g~~~vi~GPPGTGKSQTIaNlIa~~la 445 (1775)
T Consensus 40 G~~P~Ni~iYGkTGtGKT-~vt~~v~~~l~ 68 (383)
T TIGR02928 40 GSRPSNIFIYGKTGTGKT-AVTKYVMKELE 68 (383)
T ss_pred CCCCCCEEEECCCCCCHH-HHHHHHHHHHH
T ss_conf 489872588788898788-99999999999