HHsearch alignment for GI: 254780229 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=94.12 E-value=0.031 Score=38.27 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=18.8
Q ss_pred CCCCCEEEEC--CHHHCCHHHHHHHHHHCCEEEEEECC
Q ss_conf 2541078860--63236989988988611828996077
Q gi|254780229|r 1359 DVKFDLVIMD--ESSQIKPEDALGVIARGKQIVVVGDP 1394 (1775)
Q Consensus 1359 ~~~FD~VI~D--EASQ~~~~~al~al~rakqvvvvGD~ 1394 (1775)
T Consensus 463 ~i~~~~vsf~y~~~~~~vl~~vsl~i~~Ge~vaIvG~s 500 (694)
T TIGR03375 463 EIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRI 500 (694)
T ss_pred EEEEEEEEEECCCCCCHHHCCHHHEECCCCEEEEEECC
T ss_conf 49999999987988922213631188799789998058