HHsearch alignment for GI: 254780229 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=95.79 E-value=0.031 Score=38.22 Aligned_cols=55 Identities=27% Similarity=0.455 Sum_probs=44.8
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHHHHH-HHHCCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 514895599428787703899999999-9967982899601058999999864435
Q gi|254780229|r 416 VINGKNLIIEGPPGTGKSQTITNIIAA-AMLHGKKILFCAQKMAAIEVVRHRLEKA 470 (1775)
Q Consensus 416 ~~~g~~~vi~GPPGTGKSQTIaNlIa~-~la~Gk~VLfVaeK~aALdVV~~RL~~~ 470 (1775)
T Consensus 191 l~~g~LiIiaARPsmGKTafalnia~n~A~~~g~~Vl~fSLEMs~eql~~R~la~~ 246 (421)
T TIGR03600 191 LVKGDLIVIGARPSMGKTTLALNIAENVALREGKPVLFFSLEMSAEQLGERLLASK 246 (421)
T ss_pred CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 99886899985467874599999999999866983899925799999999999985