HHsearch alignment for GI: 254780229 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=94.73 E-value=0.022 Score=39.76 Aligned_cols=40 Identities=33% Similarity=0.468 Sum_probs=31.1
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCEEEEEEC
Q ss_conf 8514895599428787703899999999996-7982899601
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAML-HGKKILFCAQ 455 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~Gk~VLfVae 455 (1775)
T Consensus 20 ~i~~Ge~~~i~GpSGsGKS-TLL~~i~gl~~p~sG~i~~~g~ 60 (206)
T TIGR03608 20 TIEKGKMVAIVGESGSGKS-TLLNIIGLLEKPDSGQVYLNGQ 60 (206)
T ss_pred EECCCCEEEEECCCCCCHH-HHHHHHHCCCCCCCEEEEECCE
T ss_conf 9869989999879997099-9999997599989759999999