HHsearch alignment for GI: 254780229 and conserved domain: cd01120

>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=96.77  E-value=0.0037  Score=47.81  Aligned_cols=44  Identities=18%  Similarity=0.400  Sum_probs=35.1

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Q ss_conf             59942878770389999999999679828996010589999998
Q gi|254780229|r  422 LIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRH  465 (1775)
Q Consensus       422 ~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~  465 (1775)
T Consensus         2 ~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ee~~~q~~~~   45 (165)
T cd01120           2 ILVFGPTGSGKTTLALQLALNIATKGGKVVYVDIEEEIEELTER   45 (165)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
T ss_conf             89998999989999999999987639979999866644899999