HHsearch alignment for GI: 254780229 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=96.77 E-value=0.0037 Score=47.81 Aligned_cols=44 Identities=18% Similarity=0.400 Sum_probs=35.1
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Q ss_conf 59942878770389999999999679828996010589999998
Q gi|254780229|r 422 LIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRH 465 (1775)
Q Consensus 422 ~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~ 465 (1775)
T Consensus 2 ~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~ee~~~q~~~~ 45 (165)
T cd01120 2 ILVFGPTGSGKTTLALQLALNIATKGGKVVYVDIEEEIEELTER 45 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
T ss_conf 89998999989999999999987639979999866644899999