HHsearch alignment for GI: 254780229 and conserved domain: cd01123

>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=95.33  E-value=0.028  Score=38.73  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=26.2

Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHH------CCCEEEEEECC
Q ss_conf             895599428787703899999999996------79828996010
Q gi|254780229|r  419 GKNLIIEGPPGTGKSQTITNIIAAAML------HGKKILFCAQK  456 (1775)
Q Consensus       419 g~~~vi~GPPGTGKSQTIaNlIa~~la------~Gk~VLfVaeK  456 (1775)
T Consensus        19 G~itEi~G~~GsGKTql~lqla~~~~~~~~~~g~~~~vvyIdtE   62 (235)
T cd01123          19 GSITEIFGEFGSGKTQLCHQLAVTVQLPIELGGLEGKAVYIDTE   62 (235)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf             87999999999849999999999984247536789629999536