HHsearch alignment for GI: 254780229 and conserved domain: cd01131

>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.

Probab=95.16  E-value=0.028  Score=38.78  Aligned_cols=37  Identities=22%  Similarity=0.430  Sum_probs=27.0

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf             5994287877038999999999967982899601058
Q gi|254780229|r  422 LIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMA  458 (1775)
Q Consensus       422 ~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~a  458 (1775)
T Consensus         4 iLitG~TGSGKTTtl~all~~i~~~~~~~IiTiEDPi   40 (198)
T cd01131           4 VLVTGPTGSGKSTTLAAMIDYINKNKTHHILTIEDPI   40 (198)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCH
T ss_conf             9998999997999999999853637883699964737