>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=94.21  E-value=0.028  Score=38.67  Aligned_cols=39  Identities=26%  Similarity=0.372  Sum_probs=30.8

Q ss_pred             HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC----CCEEEEEE
Q ss_conf             85148955994287877038999999999967----98289960
Q gi|254780229|r  415 DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH----GKKILFCA  454 (1775)
Q Consensus       415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~----Gk~VLfVa  454 (1775)
T Consensus        29 ~i~~Gei~~llG~nGsGKS-TLl~~l~G~~~~~~~~~G~i~~~g   71 (202)
T cd03233          29 VVKPGEMVLVLGRPGSGCS-TLLKALANRTEGNVSVEGDIHYNG   71 (202)
T ss_pred             EECCCEEEEEECCCCCCHH-HHHHHHHCCCCCCCCEEEEEEECC
T ss_conf             9809849999989999889-999998378789875137999999