HHsearch alignment for GI: 254780229 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=94.60 E-value=0.024 Score=39.40 Aligned_cols=46 Identities=22% Similarity=0.418 Sum_probs=33.8
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CCEEEEEECCHHHHH
Q ss_conf 85148955994287877038999999999967-982899601058999
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-GKKILFCAQKMAAIE 461 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-Gk~VLfVaeK~aALd 461 (1775)
T Consensus 26 ~i~~G~~v~ivG~sGsGKS-TLl~ll~gl~~p~~G~I~i~g~~~~~~~ 72 (220)
T cd03245 26 TIRAGEKVAIIGRVGSGKS-TLLKLLAGLYKPTSGSVLLDGTDIRQLD 72 (220)
T ss_pred EECCCCEEEEECCCCCHHH-HHHHHHHCCCCCCCCEEEECCEEHHHHC
T ss_conf 9879999999999998599-9999996725478658999999957725