HHsearch alignment for GI: 254780229 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.08 E-value=0.036 Score=37.58 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=29.9
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCC-CEEEE
Q ss_conf 851489559942878770389999999999679-82899
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAMLHG-KKILF 452 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~G-k~VLf 452 (1775)
T Consensus 23 ~i~~Ge~~~iiGpsGsGKS-TLl~~i~gl~~p~~G~I~~ 60 (241)
T cd03256 23 SINPGEFVALIGPSGAGKS-TLLRCLNGLVEPTSGSVLI 60 (241)
T ss_pred EECCCCEEEEECCCCCHHH-HHHHHHHCCCCCCCEEEEE
T ss_conf 9999989999999983399-9999997499998559999