HHsearch alignment for GI: 254780229 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=94.21 E-value=0.034 Score=37.84 Aligned_cols=38 Identities=26% Similarity=0.378 Sum_probs=30.3
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf 85148955994287877038999999999967-9828996
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-GKKILFC 453 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-Gk~VLfV 453 (1775)
T Consensus 23 ~i~~Ge~~~IvG~sGsGKS-TLl~~l~g~~~~~~G~I~~~ 61 (218)
T cd03290 23 RIPTGQLTMIVGQVGCGKS-SLLLAILGEMQTLEGKVHWS 61 (218)
T ss_pred EECCCCEEEEECCCCCCHH-HHHHHHHCCCCCCCCEEEEC
T ss_conf 9869999999999998099-99999855565677649989