HHsearch alignment for GI: 254780229 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.86 E-value=0.018 Score=40.61 Aligned_cols=51 Identities=27% Similarity=0.481 Sum_probs=36.2
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH
Q ss_conf 85148955994287877038999999999967-98289960105899999986
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-GKKILFCAQKMAAIEVVRHR 466 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-Gk~VLfVaeK~aALdVV~~R 466 (1775)
T Consensus 21 ~v~~Ge~~~iiGpSGsGKS-TLlr~i~Gl~~p~~G~I~~~G~di~~~~~~~r~ 72 (235)
T cd03299 21 EVERGDYFVILGPTGSGKS-VLLETIAGFIKPDSGKILLNGKDITNLPPEKRD 72 (235)
T ss_pred EECCCCEEEEECCCCCHHH-HHHHHHHCCCCCCCEEEEECCEECCCCCHHHCC
T ss_conf 9889989999999963599-999999749999965999999999999976789