HHsearch alignment for GI: 254780229 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=96.38 E-value=0.0055 Score=46.06 Aligned_cols=45 Identities=18% Similarity=0.297 Sum_probs=32.0
Q ss_pred HHHHHHH-HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CCEEEEE
Q ss_conf 6899999-85148955994287877038999999999967-9828996
Q gi|254780229|r 408 SQHSAVI-DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-GKKILFC 453 (1775)
Q Consensus 408 SQ~~av~-~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-Gk~VLfV 453 (1775)
T Consensus 127 ~~~~~L~~~v~~~~~ilIsG~TGSGKT-T~l~all~~i~~~~~riiti 173 (283)
T pfam00437 127 DIAEFLRQAVQARGNILVSGGTGSGKT-TLLYALLNEINTDDERIVTI 173 (283)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHH-HHHHHHHHHCCCCCCCEEEE
T ss_conf 999999999981975999889999889-99999998408777627873