HHsearch alignment for GI: 254780229 and conserved domain: pfam00910
>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=95.08 E-value=0.017 Score=41.01 Aligned_cols=24 Identities=46% Similarity=0.850 Sum_probs=20.9
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 5994287877038999999999967
Q gi|254780229|r 422 LIIEGPPGTGKSQTITNIIAAAMLH 446 (1775)
Q Consensus 422 ~vi~GPPGTGKSQTIaNlIa~~la~ 446 (1775)
T Consensus 1 i~l~G~~G~GKS-~~a~~la~~~~~ 24 (105)
T pfam00910 1 IWLYGPPGCGKS-TLAKYLARALLD 24 (105)
T ss_pred CEEECCCCCCHH-HHHHHHHHHHHH
T ss_conf 989799989889-999999999999