HHsearch alignment for GI: 254780229 and conserved domain: pfam02456

>pfam02456 Adeno_IVa2 Adenovirus IVa2 protein. IVa2 protein can interact with the adenoviral packaging signal and that this interaction involves DNA sequences that have previously been demonstrated to be required for packaging. During the course of lytic infection, the adenovirus major late promoter (MLP) is induced to high levels after replication of viral DNA has started. IVa2 is a transcriptional activator of the major late promoter.
Probab=95.35  E-value=0.014  Score=41.78  Aligned_cols=29  Identities=17%  Similarity=0.354  Sum_probs=14.1

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEC
Q ss_conf             200114777656246899999832142698870
Q gi|254780229|r 1587 VFQRFGPINSDIGWRRLNVLFTRSRRRIEVFST 1619 (1775)
Q Consensus      1587 ~~~~fGpln~~gg~rRlNVa~sRAr~~~~v~~s 1619 (1775)
T Consensus       241 VLHNmNPR~d~~G----NI~~LKIQaK~HIiSp  269 (370)
T pfam02456       241 VLHNMNPRTDIGG----NIATLKIQAKLHILSP  269 (370)
T ss_pred             EEECCCCCCCCCC----CCCCHHHHHEEEEECC
T ss_conf             9605786666679----8341102011345168