HHsearch alignment for GI: 254780229 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=97.60 E-value=0.00037 Score=58.32 Aligned_cols=61 Identities=25% Similarity=0.333 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 4689999985148955994287877038999999999967982899601058999999864
Q gi|254780229|r 407 SSQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRL 467 (1775)
Q Consensus 407 sSQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL 467 (1775)
T Consensus 6 ~yQ~~a~~~~~~~~~~~i~~pTGsGKT~~~~~~i~~~~~~~~~~lvlvp~~~L~~Q~~~~~ 66 (103)
T pfam04851 6 PYQIEAIRNLLEKKRGLIVMATGSGKTLTAAKLIARLLKGKKKVLFLVPRKDLLEQALEEF 66 (103)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
T ss_conf 9999999999963986999589998799999999999846992999908299999999965