HHsearch alignment for GI: 254780229 and conserved domain: pfam06068

>pfam06068 TIP49 TIP49 C-terminus. This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear
Probab=96.74  E-value=0.0028  Score=49.08  Aligned_cols=58  Identities=34%  Similarity=0.695  Sum_probs=41.2

Q ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH-HHHH
Q ss_conf             489559942878770389999999999679828996010589999998644358441365402661108999999-9999
Q gi|254780229|r  418 NGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAGLGEFCLELHSHKVHKRAILDD-LRKR  496 (1775)
Q Consensus       418 ~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~gLg~~cleLHs~ka~k~~vl~~-L~~~  496 (1775)
T Consensus        49 aGraiLlaGppGTGKT-AlA~aiakeL--G~~vPF~~--i~g-----------------SEvyS~E~kKTE~L~qafRrs  106 (395)
T pfam06068        49 AGRAVLIAGPPGTGKT-ALAIAISKEL--GEDTPFCP--ISG-----------------SEVYSLEMKKTEALTQAFRKA  106 (395)
T ss_pred             CCCEEEEECCCCCCHH-HHHHHHHHHH--CCCCCEEE--EEH-----------------HEEECCCCCHHHHHHHHHHHH
T ss_conf             7738998779998889-9999999974--87997345--001-----------------112125654889999999887


Q ss_pred             H
Q ss_conf             8
Q gi|254780229|r  497 I  497 (1775)
Q Consensus       497 l  497 (1775)
T Consensus       107 I  107 (395)
T pfam06068       107 I  107 (395)
T ss_pred             H
T ss_conf             5