HHsearch alignment for GI: 254780229 and conserved domain: pfam07652
>pfam07652 Flavi_DEAD Flavivirus DEAD domain.
Probab=95.19 E-value=0.072 Score=34.40 Aligned_cols=54 Identities=15% Similarity=0.300 Sum_probs=46.3
Q ss_pred CCCCEEEECCCCCCCHHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 489559942878770389-999999999679828996010589999998644358
Q gi|254780229|r 418 NGKNLIIEGPPGTGKSQT-ITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAG 471 (1775)
Q Consensus 418 ~g~~~vi~GPPGTGKSQT-IaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~g 471 (1775)
T Consensus 1 kg~~t~ld~HPGaGKTr~vLP~~v~~~i~~~lRtlVLaPTRVV~~Em~eAL~g~~ 55 (146)
T pfam07652 1 KGTLTVLDLHPGAGKTRKVLPELVRECIDRRLRTLVLAPTRVVLAEMEEALRGLP 55 (146)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 9832798538999970224899999999728618997727999999999975899