HHsearch alignment for GI: 254780229 and conserved domain: pfam07652

>pfam07652 Flavi_DEAD Flavivirus DEAD domain.
Probab=95.19  E-value=0.072  Score=34.40  Aligned_cols=54  Identities=15%  Similarity=0.300  Sum_probs=46.3

Q ss_pred             CCCCEEEECCCCCCCHHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf             489559942878770389-999999999679828996010589999998644358
Q gi|254780229|r  418 NGKNLIIEGPPGTGKSQT-ITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAG  471 (1775)
Q Consensus       418 ~g~~~vi~GPPGTGKSQT-IaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~g  471 (1775)
T Consensus         1 kg~~t~ld~HPGaGKTr~vLP~~v~~~i~~~lRtlVLaPTRVV~~Em~eAL~g~~   55 (146)
T pfam07652         1 KGTLTVLDLHPGAGKTRKVLPELVRECIDRRLRTLVLAPTRVVLAEMEEALRGLP   55 (146)
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf             9832798538999970224899999999728618997727999999999975899