HHsearch alignment for GI: 254780229 and conserved domain: pfam07724

>pfam07724 AAA_2 AAA domain (Cdc48 subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=95.28  E-value=0.023  Score=39.53  Aligned_cols=34  Identities=21%  Similarity=0.500  Sum_probs=28.3

Q ss_pred             CCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             95599428787703899999999996798289960
Q gi|254780229|r  420 KNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCA  454 (1775)
Q Consensus       420 ~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVa  454 (1775)
T Consensus         4 ~~~l~~GPsGvGKT-~lAk~la~~l~~~~~~~i~~   37 (168)
T pfam07724         4 GSFLFLGPTGVGKT-ELAKALAELLFGDERALIRI   37 (168)
T ss_pred             EEEEEECCCCCCHH-HHHHHHHHHHCCCCCCEEEE
T ss_conf             79998898998999-99999999967985344885