HHsearch alignment for GI: 254780229 and conserved domain: pfam10443

>pfam10443 RNA12 RNA12 protein. This family includes RNA12 from S. cerevisiae. That protein contains an RRM domain. This region is C-terminal to that and includes a P-loop motif suggesting this region binds to NTP. The RNA12 proteins is involved in pre-rRNA maturation.

Probab=94.30  E-value=0.051  Score=35.94  Aligned_cols=34  Identities=21%  Similarity=0.536  Sum_probs=27.3

Q ss_pred             CCCE-EEECCCCCCCHHHHHHHH-HHHHHCCCEEEEEECC
Q ss_conf             8955-994287877038999999-9999679828996010
Q gi|254780229|r  419 GKNL-IIEGPPGTGKSQTITNII-AAAMLHGKKILFCAQK  456 (1775)
Q Consensus       419 g~~~-vi~GPPGTGKSQTIaNlI-a~~la~Gk~VLfVaeK  456 (1775)
T Consensus        16 ~nTFIvV~GPrGSGK~----eLV~d~~L~~r~~vL~IDC~   51 (428)
T pfam10443        16 PNTFIVVQGPRGSGKR----ELVMDRVLKDRKNVLVIDCD   51 (428)
T ss_pred             CCEEEEEECCCCCCCC----HHHHHHHHCCCCCEEEEECH
T ss_conf             9858999799998843----34658876368887999786